[←][→] ath   At5g53080 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein      
GO BP
GO:0031425 [list] [network] chloroplast RNA processing  (25 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_568784.1 
BLAST NP_568784.1 
Orthologous [Ortholog page] LOC7464534 (ppo)  LOC11421662 (mtr)  LOC100805230 (gma)  LOC101262292 (sly)  LOC103852059 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_568784.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_568784.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G53080 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.0 POLH Y-family DNA polymerase H [detail] 834503
6.0 AT1G78930 Mitochondrial transcription termination factor family protein [detail] 844232
5.9 AT2G42450 alpha/beta-Hydrolases superfamily protein [detail] 818845
5.7 AT5G08270 C5orf35 [detail] 830723
5.3 AT1G27410 DNA repair metallo-beta-lactamase family protein [detail] 839631
4.5 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein [detail] 835082
Coexpressed
gene list		 [Coexpressed gene list for AT5G53080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248299_at
248299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248299_at
248299_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248299_at
248299_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835388      
Refseq ID (protein) NP_568784.1 


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