[←][→] ath   At5g53210 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0090547 [list] [network] response to low humidity  (3 genes)  IEP  
GO:2000038 [list] [network] regulation of stomatal complex development  (16 genes)  IMP  
GO:0010052 [list] [network] guard cell differentiation  (22 genes)  IEA  
GO:0047484 [list] [network] regulation of response to osmotic stress  (47 genes)  IMP  
GO:0010374 [list] [network] stomatal complex development  (75 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (883 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0001216 [list] [network] DNA-binding transcription activator activity  (18 genes)  IDA  
GO:0046983 [list] [network] protein dimerization activity  (421 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  IEA ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04016 [list] [network] MAPK signaling pathway - plant (139 genes)
Protein NP_001331493.1  NP_200133.2 
BLAST NP_001331493.1  NP_200133.2 
Orthologous [Ortholog page] MUTE (ath)  LOC7454250 (ppo)  LOC7489812 (ppo)  LOC11441461 (mtr)  LOC18105680 (ppo)  LOC25482367 (mtr)  LOC25486089 (mtr)  SPCH1 (gma)  LOC100785890 (gma)  SPCH4 (gma)  SPCH2 (gma)  SPCH3 (gma)  LOC100810771 (gma)  LOC101246861 (sly)  LOC101256653 (sly)  LOC103844802 (bra)  LOC103849991 (bra)  LOC103852045 (bra)  LOC103854455 (bra)  LOC103857095 (bra)  LOC103859140 (bra)  LOC107275355 (osa)  LOC107276250 (osa)  LOC123040731 (tae)  LOC123048785 (tae)  LOC123184797 (tae)  LOC123429508 (hvu) 
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001331493.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  pero 1,  cysk 1  (predict for NP_200133.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001331493.1)
other 7  (predict for NP_200133.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
Genes directly connected with SPCH on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.4 TMM Leucine-rich repeat (LRR) family protein [detail] 844348
14.1 EPF2 Putative membrane lipoprotein [detail] 840324
12.7 AT4G31805 WRKY family transcription factor [detail] 829309
9.0 HB31 homeobox protein 31 [detail] 838006
7.3 AT3G49900 Phototropic-responsive NPH3 family protein [detail] 824152
7.2 HB21 homeobox protein 21 [detail] 814784
6.3 SOL1 Tesmin/TSO1-like CXC domain-containing protein [detail] 821847
4.9 AS2 Lateral organ boundaries (LOB) domain family protein [detail] 842873
Coexpressed
gene list		 [Coexpressed gene list for SPCH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248247_at
248247_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248247_at
248247_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248247_at
248247_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835402      
Refseq ID (protein) NP_001331493.1 
NP_200133.2 


The preparation time of this page was 0.1 [sec].