[←][→] ath   At5g53370 Gene
functional annotation
Function   pectin methylesterase PCR fragment F    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045490 [list] [network] pectin catabolic process  (78 genes)  IEA  
GO:0042545 [list] [network] cell wall modification  (160 genes)  IEA  
GO:0045935 [list] [network] positive regulation of nucleobase-containing compound metabolic process  (337 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0030599 [list] [network] pectinesterase activity  (16 genes)  ISS  
KEGG
Protein NP_001332265.1  NP_200149.1 
BLAST NP_001332265.1  NP_200149.1 
Orthologous [Ortholog page] AT3G49220 (ath)  LOC4329045 (osa)  LOC7475195 (ppo)  LOC7496396 (ppo)  LOC9270906 (osa)  LOC11432815 (mtr)  LOC11441469 (mtr)  LOC100776752 (gma)  LOC100808236 (gma)  LOC101255775 (sly)  LOC101258375 (sly)  LOC103844813 (bra)  LOC103852037 (bra)  LOC103873080 (bra)  LOC103873499 (bra)  LOC103875179 (bra)  LOC106796002 (gma) 
Subcellular
localization
wolf
chlo 5,  chlo_mito 3,  cyto 2,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1  (predict for NP_001332265.1)
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 1,  vacu 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_200149.1)
Subcellular
localization
TargetP
other 3  (predict for NP_001332265.1)
other 9  (predict for NP_200149.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 2
Genes directly connected with PMEPCRF on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.0 BLH1 BEL1-like homeodomain 1 [detail] 818167
4.7 CYP81H1 cytochrome P450, family 81, subfamily H, polypeptide 1 [detail] 829886
4.5 CYP705A19 cytochrome P450, family 705, subfamily A, polypeptide 19 [detail] 821553
Coexpressed
gene list		 [Coexpressed gene list for PMEPCRF]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248263_at
248263_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248263_at
248263_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248263_at
248263_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835418      
Refseq ID (protein) NP_001332265.1 
NP_200149.1 


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