[←][→] ath   At5g53550 Gene
functional annotation
Function   YELLOW STRIPE like 3  
GO BP
GO:0009624 [list] [network] response to nematode  (86 genes)  HEP  
GO:0048316 [list] [network] seed development  (1294 genes)  IGI  
GO:0003006 [list] [network] developmental process involved in reproduction  (2266 genes)  IGI  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0051980 [list] [network] iron-nicotianamine transmembrane transporter activity  (2 genes)  IGI  
GO:0035673 [list] [network] oligopeptide transmembrane transporter activity  (24 genes)  IEA  
KEGG
Protein NP_001190532.1  NP_001332078.1  NP_001332079.1  NP_001332080.1  NP_001332081.1  NP_200167.2 
BLAST NP_001190532.1  NP_001332078.1  NP_001332079.1  NP_001332080.1  NP_001332081.1  NP_200167.2 
Orthologous [Ortholog page] YSL1 (ath)  YSL2 (ath)  LOC4330161 (osa)  LOC4336545 (osa)  LOC4336546 (osa)  LOC7464319 (ppo)  LOC7477824 (ppo)  LOC9268232 (osa)  LOC11429596 (mtr)  LOC11430554 (mtr)  LOC11437925 (mtr)  LOC25484564 (mtr)  LOC100785643 (gma)  LOC100795669 (gma)  LOC100803306 (gma)  LOC100807763 (gma)  LOC100810191 (gma)  LOC100820417 (gma)  LOC101256566 (sly)  LOC101265663 (sly)  LOC103834971 (bra)  LOC103844830 (bra)  LOC103861463 (bra)  LOC103861748 (bra)  LOC103874307 (bra)  LOC112418699 (mtr)  LOC120579424 (mtr)  LOC123046180 (tae)  LOC123046187 (tae)  LOC123054062 (tae)  LOC123054063 (tae)  LOC123127872 (tae)  LOC123137768 (tae)  LOC123141586 (tae)  LOC123144965 (tae)  LOC123189961 (tae)  LOC123189963 (tae)  LOC123404400 (hvu)  LOC123412249 (hvu)  LOC123427389 (hvu)  LOC123427390 (hvu)  LOC123427391 (hvu) 
Subcellular
localization
wolf
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001190532.1)
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001332078.1)
chlo 3,  extr 3,  plas 2,  nucl 1,  chlo_mito 1  (predict for NP_001332079.1)
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001332080.1)
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_001332081.1)
plas 6,  E.R. 3,  nucl_plas 3,  cysk_plas 3,  mito_plas 3,  cyto_plas 3  (predict for NP_200167.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001190532.1)
other 9  (predict for NP_001332078.1)
scret 8  (predict for NP_001332079.1)
other 9  (predict for NP_001332080.1)
other 9  (predict for NP_001332081.1)
other 9  (predict for NP_200167.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with YSL3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.9 CCH copper chaperone [detail] 824790
5.9 YSL2 YELLOW STRIPE like 2 [detail] 832509
4.6 FSD1 Fe superoxide dismutase 1 [detail] 828613
Coexpressed
gene list		 [Coexpressed gene list for YSL3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248276_at
248276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248276_at
248276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248276_at
248276_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835437      
Refseq ID (protein) NP_001190532.1 
NP_001332078.1 
NP_001332079.1 
NP_001332080.1 
NP_001332081.1 
NP_200167.2 


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