[←][→] ath   AT5G53800 Gene
functional annotation
Function   nucleic acid-binding protein  
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG
Protein NP_568799.1 
BLAST NP_568799.1 
Orthologous [Ortholog page] LOC4336481 (osa)  LOC7460828 (ppo)  LOC25487355 (mtr)  LOC100193500 (zma)  LOC100243517 (vvi)  LOC100778706 (gma)  LOC100808770 (gma)  LOC101248648 (sly)  LOC103844847 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_568799.1)
Subcellular
localization
TargetP
other 9  (predict for NP_568799.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G53800 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.5 AT5G41020 myb family transcription factor [detail] 834104
11.1 AT4G15030 folate-sensitive fragile site protein [detail] 827162
10.4 AT2G40650 PRP38 family protein [detail] 818660
9.8 PRHA pathogenesis related homeodomain protein A [detail] 829117
9.7 NF-YB11 nuclear factor Y, subunit B11 [detail] 817292
9.4 AT3G58110 hypothetical protein [detail] 824980
9.3 AT5G13340 arginine/glutamate-rich 1 protein [detail] 831175
9.3 AT1G15200 protein-protein interaction regulator family protein [detail] 838086
9.2 AT4G08580 microfibrillar-associated protein-like protein [detail] 826419
9.1 AT5G40340 Tudor/PWWP/MBT superfamily protein [detail] 834032
8.9 AT5G22080 Chaperone DnaJ-domain superfamily protein [detail] 832269
8.9 AT4G27120 DDRGK domain protein [detail] 828820
8.9 AT3G57910 D111/G-patch domain-containing protein [detail] 824960
8.6 CYP59 cyclophilin 59 [detail] 841810
8.6 AT2G44200 pre-mRNA splicing factor domain-containing protein [detail] 819028
8.5 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein [detail] 822039
8.5 DDL SMAD/FHA domain-containing protein [detail] 821601
8.3 PMD1 Tropomyosin-like protein [detail] 825053
7.7 HOS15 WD-40 repeat family protein [detail] 836867
7.4 AT5G53930 transcriptional regulator ATRX-like protein [detail] 835476
7.3 AT1G65280 DNAJ heat shock N-terminal domain-containing protein [detail] 842835
7.1 AT3G13780 SMAD/FHA domain-containing protein [detail] 820588
7.1 AT3G48120 serine/arginine-rich splicing factor [detail] 823967
6.8 AT5G19960 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 832118
6.7 AT5G47660 Homeodomain-like superfamily protein [detail] 834817
5.8 AT3G05760 C2H2 and C2HC zinc fingers superfamily protein [detail] 819745
5.6 NF-YC10 nuclear factor Y, subunit C10 [detail] 837313
Coexpressed
gene list		 [Coexpressed gene list for AT5G53800]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248228_at
248228_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248228_at
248228_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248228_at
248228_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835461      
Refseq ID (protein) NP_568799.1 


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