[←][→] ath   AT5G54090 Gene
functional annotation
Function   DNA mismatch repair protein MutS, type 2  
GO BP
GO CC
GO:0032300 [list] [network] mismatch repair complex  (8 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0030983 [list] [network] mismatched DNA binding  (9 genes)  IBA  
GO:0008094 [list] [network] DNA-dependent ATPase activity  (82 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IBA  
KEGG
Protein NP_200220.2 
BLAST NP_200220.2 
Orthologous [Ortholog page] LOC4349080 (osa)  LOC11405423 (mtr)  LOC100241843 (vvi)  LOC100382240 (zma)  LOC100791225 (gma)  LOC101255670 (sly)  LOC103851994 (bra) 
Subcellular
localization
wolf
mito 5,  chlo 4  (predict for NP_200220.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_200220.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 2
Genes directly connected with AT5G54090 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 RSY3 Adenine nucleotide alpha hydrolases-like superfamily protein [detail] 822052
5.7 AT5G19210 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 832041
5.2 PFC1 Ribosomal RNA adenine dimethylase family protein [detail] 839283
3.9 ATSERAT3;1 Trimeric LpxA-like enzymes superfamily protein [detail] 816271
Coexpressed
gene list		 [Coexpressed gene list for AT5G54090]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248189_at
248189_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248189_at
248189_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248189_at
248189_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835495      
Refseq ID (protein) NP_200220.2 


The preparation time of this page was 0.2 [sec].