[←][→] ath   AT5G54260 Gene
functional annotation
Function   DNA repair and meiosis protein (Mre11)  
GO BP
GO:0007095 [list] [network] mitotic G2 DNA damage checkpoint  (2 genes)  IBA  
GO:0097552 [list] [network] mitochondrial double-strand break repair via homologous recombination  (2 genes)  IBA  
GO:0042138 [list] [network] meiotic DNA double-strand break formation  (9 genes)  IBA  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (16 genes)  IBA  
GO:0000723 [list] [network] telomere maintenance  (36 genes)  IBA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (68 genes)  IBA  
GO CC
GO:0030870 [list] [network] Mre11 complex  (3 genes)  IEA  
GO:0000795 [list] [network] synaptonemal complex  (5 genes)  IDA  
GO:0000791 [list] [network] euchromatin  (9 genes)  IDA  
GO:0000784 [list] [network] nuclear chromosome, telomeric region  (23 genes)  IBA  
GO:0000785 [list] [network] chromatin  (160 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (65 genes)  IEA  
GO:0004519 [list] [network] endonuclease activity  (145 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03440 [list] [network] Homologous recombination (67 genes)
ath03450 [list] [network] Non-homologous end-joining (8 genes)
Protein NP_001330550.1  NP_200237.1 
BLAST NP_001330550.1  NP_200237.1 
Orthologous [Ortholog page] LOC4337137 (osa)  LOC11436847 (mtr)  LOC100252167 (vvi)  LOC100285133 (zma)  LOC100801335 (gma)  LOC101264663 (sly)  LOC103844885 (bra) 
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for NP_001330550.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_200237.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001330550.1)
other 9  (predict for NP_200237.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03450 Non-homologous end-joining 2
Genes directly connected with MRE11 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.2 AT1G03960 Calcium-binding EF hand family protein [detail] 839361
5.1 AT5G10900 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 830957
4.6 PRP40B pre-mRNA-processing protein 40B [detail] 821504
3.7 DOG1 delay of germination 1 [detail] 834623
Coexpressed
gene list		 [Coexpressed gene list for MRE11]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248152_at
248152_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248152_at
248152_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248152_at
248152_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835514      
Refseq ID (protein) NP_001330550.1 
NP_200237.1 


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