[←][→] ath   AT5G54290 Gene
functional annotation
Function   cytochrome c biogenesis protein family  
GO BP
GO:0010190 [list] [network] cytochrome b6f complex assembly  (10 genes)  IMP  
GO:0045454 [list] [network] cell redox homeostasis  (142 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005623 [list] [network] cell  (76 genes)  IMP  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IEA  
GO:0055035 [list] [network] plastid thylakoid membrane  (373 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_001190537.1  NP_200240.1 
BLAST NP_001190537.1  NP_200240.1 
Orthologous [Ortholog page] LOC4349738 (osa)  LOC9266150 (osa)  LOC25502555 (mtr)  LOC100245228 (vvi)  CCDA (gma)  LOC100815609 (gma)  LOC101268704 (sly)  LOC103647117 (zma)  LOC103851974 (bra) 
Subcellular
localization
wolf
chlo 4,  plas 2,  E.R. 2,  chlo_mito 2,  E.R._plas 2  (predict for NP_001190537.1)
chlo 3,  plas 3,  E.R. 2,  extr 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_200240.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for NP_001190537.1)
mito 4,  chlo 3  (predict for NP_200240.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
Genes directly connected with CcdA on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT5G03880 Thioredoxin family protein [detail] 831679
6.3 APE1 acclimation of photosynthesis to environment [detail] 833856
5.7 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein [detail] 817314
Coexpressed
gene list		 [Coexpressed gene list for CcdA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248181_at
248181_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248181_at
248181_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248181_at
248181_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835517      
Refseq ID (protein) NP_001190537.1 
NP_200240.1 


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