[←][→] ath   At5g54290 Gene
functional annotation
Function   cytochrome c biogenesis protein family      
GO BP
GO:0010190 [list] [network] cytochrome b6f complex assembly  (8 genes)  IMP  
GO:0017004 [list] [network] cytochrome complex assembly  (22 genes)  IEA  
GO:0045454 [list] [network] cell redox homeostasis  (27 genes)  IMP  
GO CC
GO:0055035 [list] [network] plastid thylakoid membrane  (323 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  IDA  
GO MF
KEGG
Protein NP_001190537.1  NP_200240.1 
BLAST NP_001190537.1  NP_200240.1 
Orthologous [Ortholog page] LOC4349738 (osa)  LOC9266150 (osa)  LOC18095650 (ppo)  LOC25502555 (mtr)  CCDA (gma)  LOC100815609 (gma)  LOC101268704 (sly)  LOC103851974 (bra)  LOC123111240 (tae)  LOC123120332 (tae)  LOC123396984 (hvu) 
Subcellular
localization
wolf
chlo 4,  plas 2,  E.R. 2,  chlo_mito 2,  E.R._plas 2  (predict for NP_001190537.1)
chlo 3,  plas 3,  E.R. 2,  extr 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  cyto_plas 1  (predict for NP_200240.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for NP_001190537.1)
mito 4,  chlo 3  (predict for NP_200240.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CcdA on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 AT5G03880 Thioredoxin family protein [detail] 831679
8.7 APE1 acclimation of photosynthesis to environment [detail] 833856
7.9 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein [detail] 817314
7.2 AT3G01920 DHBP synthase RibB-like alpha/beta domain-containing protein [detail] 821220
Coexpressed
gene list		 [Coexpressed gene list for CcdA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248181_at
248181_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248181_at
248181_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248181_at
248181_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835517      
Refseq ID (protein) NP_001190537.1 
NP_200240.1 


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