ATTED-II : GeneID search result

[←][→] ath At5g54400 Gene

functional annotation

Function

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

GO BP

GO:0000902 [list] [network] cell morphogenesis	(474 genes)	IEA
GO:0016049 [list] [network] cell growth	(527 genes)	IEA
GO:0009888 [list] [network] tissue development	(1806 genes)	IEA

GO CC

GO:0000325 [list] [network] plant-type vacuole	(785 genes)	HDA
GO:0005737 [list] [network] cytoplasm	(13880 genes)	ISM

GO MF

KEGG

Protein

NP_200251.1

BLAST

NP_200251.1

Orthologous

[Ortholog page] AT3G15530 (ath) LOC7462356 (ppo) LOC18095634 (ppo) LOC25487398 (mtr) LOC100804520 (gma) LOC100816657 (gma) LOC101246550 (sly) LOC103840703 (bra) LOC103851963 (bra) LOC103869909 (bra) LOC112329132 (ppo)

Subcellular
localization
wolf

cyto 4, chlo 1, nucl 1, pero 1, mito 1, E.R. 1, cysk_nucl 1, nucl_plas 1

(predict for NP_200251.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for NP_200251.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2

Genes directly connected with AT5G54400 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.3	AT4G19460	UDP-Glycosyltransferase superfamily protein	[detail]	827687
5.5	AT2G01610	Plant invertase/pectin methylesterase inhibitor superfamily protein	[detail]	814690
4.9	MYB108	myb domain protein 108	[detail]	819827

Coexpressed
gene list

[Coexpressed gene list for AT5G54400]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248154_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248154_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248154_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835528
Refseq ID (protein)	NP_200251.1

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