[←][→] ath   AT5G54580 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0080156 [list] [network] mitochondrial mRNA modification  (27 genes)  IMP  
GO:0006397 [list] [network] mRNA processing  (376 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA IMP  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_200269.1 
BLAST NP_200269.1 
Orthologous [Ortholog page] LOC4343540 (osa)  LOC4344631 (osa)  LOC7454395 (ppo)  LOC25492944 (mtr)  LOC100253846 (vvi)  LOC100282339 (zma)  LOC100283837 (zma)  LOC100784609 (gma)  LOC100789351 (gma)  LOC101264445 (sly)  LOC103844911 (bra)  LOC103857036 (bra) 
Subcellular
localization
wolf
chlo 8,  nucl 1  (predict for NP_200269.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_200269.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
Genes directly connected with AT5G54580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 PHB6 prohibitin 6 [detail] 816575
7.5 LON1 lon protease 1 [detail] 832744
7.3 ATWHY2 WHIRLY 2 [detail] 843467
6.1 PFD3 prefoldin 3 [detail] 835011
Coexpressed
gene list		 [Coexpressed gene list for AT5G54580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248173_at
248173_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248173_at
248173_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248173_at
248173_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835546      
Refseq ID (protein) NP_200269.1 


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