[←][→] ath   At5g54640 Gene
functional annotation
Function   Histone superfamily protein  
GO BP
GO:0009294 [list] [network] DNA-mediated transformation  (26 genes)  IMP  
GO:0009611 [list] [network] response to wounding  (816 genes)  IEP  
GO:0009617 [list] [network] response to bacterium  (1192 genes)  IEP  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_200275.1 
BLAST NP_200275.1 
Orthologous [Ortholog page] LOC543185 (tae)  HTA13 (ath)  HTA2 (ath)  HTA10 (ath)  LOC4343518 (osa)  LOC4343519 (osa)  LOC4352128 (osa)  LOC7454400 (ppo)  LOC7494319 (ppo)  LOC9267462 (osa)  LOC11408670 (mtr)  LOC11409476 (mtr)  LOC18095880 (ppo)  LOC100500068 (gma)  LOC100782447 (gma)  LOC100810491 (gma)  LOC100816280 (gma)  LOC101247665 (sly)  LOC101262690 (sly)  LOC103832842 (bra)  LOC103835846 (bra)  LOC103844917 (bra)  LOC103866954 (bra)  LOC103868592 (bra)  LOC103869292 (bra)  LOC123044613 (tae)  LOC123052487 (tae)  LOC123052488 (tae)  LOC123188368 (tae)  LOC123188370 (tae)  LOC123425798 (hvu)  LOC123425799 (hvu)  LOC124708996 (osa) 
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for NP_200275.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_200275.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RAT5 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.1 HTA2 histone H2A 2 [detail] 828831
11.9 AT5G10980 Histone superfamily protein [detail] 830965
10.3 HTA10 histone H2A 10 [detail] 841528
Coexpressed
gene list		 [Coexpressed gene list for RAT5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248175_at
248175_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248175_at
248175_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248175_at
248175_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835553      
Refseq ID (protein) NP_200275.1 


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