[←][→] ath   AT5G54640 Gene
functional annotation
Function   Histone superfamily protein  
GO BP
GO:0009294 [list] [network] DNA mediated transformation  (26 genes)  IMP  
GO:0009611 [list] [network] response to wounding  (212 genes)  IEP  
GO:0006325 [list] [network] chromatin organization  (338 genes)  IBA  
GO:0009617 [list] [network] response to bacterium  (479 genes)  IEP  
GO CC
GO:0000786 [list] [network] nucleosome  (45 genes)  IEA  
GO:0000790 [list] [network] nuclear chromatin  (80 genes)  IBA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (122 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_200275.1 
BLAST NP_200275.1 
Orthologous [Ortholog page] HTA13 (ath)  HTA2 (ath)  HTA10 (ath)  LOC4343518 (osa)  LOC4343519 (osa)  LOC4352128 (osa)  LOC7454400 (ppo)  LOC7494319 (ppo)  LOC9267462 (osa)  LOC11408670 (mtr)  LOC11409476 (mtr)  LOC100193816 (zma)  LOC100194327 (zma)  LOC100251194 (vvi)  LOC100261342 (vvi)  LOC100265822 (vvi)  LOC100273666 (zma)  LOC100274138 (zma)  LOC100500068 (gma)  LOC100810491 (gma)  LOC101247665 (sly)  LOC101262690 (sly)  LOC103832842 (bra)  LOC103835846 (bra)  LOC103844917 (bra)  LOC103866954 (bra)  LOC103868592 (bra)  LOC103869292 (bra) 
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for NP_200275.1)
Subcellular
localization
TargetP
mito 4  (predict for NP_200275.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RAT5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.6 HTA2 histone H2A 2 [detail] 828831
10.5 AT5G10980 Histone superfamily protein [detail] 830965
9.1 HTA10 histone H2A 10 [detail] 841528
Coexpressed
gene list		 [Coexpressed gene list for RAT5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248175_at
248175_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248175_at
248175_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248175_at
248175_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835553      
Refseq ID (protein) NP_200275.1 


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