[←][→] ath   At5g54810 Gene
functional annotation
Function   tryptophan synthase beta-subunit 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009684 [list] [network] indoleacetic acid biosynthetic process  (11 genes)  TAS  
GO:0000162 [list] [network] tryptophan biosynthetic process  (17 genes)  TAS  
GO:0006979 [list] [network] response to oxidative stress  (545 genes)  IEP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM ISS  
GO MF
GO:0004834 [list] [network] tryptophan synthase activity  (6 genes)  IDA IMP  
KEGG ath00260 [list] [network] Glycine, serine and threonine metabolism (70 genes)
ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
Protein NP_200292.1 
BLAST NP_200292.1 
Orthologous [Ortholog page] TSB2 (ath)  AT5G28237 (ath)  LOC4344612 (osa)  LOC7470939 (ppo)  LOC7485533 (ppo)  LOC11424595 (mtr)  LOC11446449 (mtr)  LOC11446499 (mtr)  LOC18095932 (ppo)  TSB (gma)  LOC100792812 (gma)  LOC100801288 (gma)  LOC101249965 (sly)  LOC101254921 (sly)  LOC101256422 (sly)  LOC101256529 (sly)  LOC103836224 (bra)  LOC103836225 (bra)  LOC103837846 (bra)  LOC103844934 (bra)  LOC103861672 (bra)  LOC123147441 (tae)  LOC123157116 (tae)  LOC123165289 (tae)  LOC123407462 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_200292.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_200292.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath01200 Carbon metabolism 5
ath00260 Glycine, serine and threonine metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 3
Genes directly connected with TSB1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.4 TSA1 tryptophan synthase alpha chain [detail] 824629
8.6 AT2G04400 Aldolase-type TIM barrel family protein [detail] 814980
8.4 PRS3 phosphoribosyl pyrophosphate (PRPP) synthase 3 [detail] 837613
5.4 AlaAT1 alanine aminotransferas [detail] 838301
Coexpressed
gene list		 [Coexpressed gene list for TSB1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 835571      
Refseq ID (protein) NP_200292.1 


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