[←][→] ath   At5g54880 Gene
functional annotation
Function   DTW domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006400 [list] [network] tRNA modification  (36 genes)  IDA  
GO CC
GO MF
GO:0016432 [list] [network] tRNA-uridine aminocarboxypropyltransferase activity  (3 genes)  IEA  
KEGG
Protein NP_568814.2 
BLAST NP_568814.2 
Orthologous [Ortholog page] LOC4333278 (osa)  LOC11436068 (mtr)  LOC18095965 (ppo)  LOC100797499 (gma)  LOC101266741 (sly)  LOC103851916 (bra)  LOC123046735 (tae)  LOC123054585 (tae)  LOC123133808 (tae)  LOC123143763 (tae)  LOC123190449 (tae)  LOC123402436 (hvu)  LOC123430800 (hvu) 
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_568814.2)
Subcellular
localization
TargetP
mito 2  (predict for NP_568814.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G54880 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT1G79080 Pentatricopeptide repeat (PPR) superfamily protein [detail] 844249
6.4 AT1G71060 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 843446
6.2 AT5G63290 Radical SAM superfamily protein [detail] 836449
5.8 THO7 Tho complex subunit 7/Mft1p [detail] 831542
Coexpressed
gene list		 [Coexpressed gene list for AT5G54880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248145_at
248145_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248145_at
248145_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248145_at
248145_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835579      
Refseq ID (protein) NP_568814.2 


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