[←][→] ath   At5g55550 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG ath03015 [list] [network] mRNA surveillance pathway (119 genes)
Protein NP_001190546.1  NP_001331842.1  NP_001331843.1  NP_001331844.1  NP_001331845.1  NP_001331846.1  NP_001331847.1  NP_001331848.1  NP_568826.1  NP_851195.1  NP_974937.1 
BLAST NP_001190546.1  NP_001331842.1  NP_001331843.1  NP_001331844.1  NP_001331845.1  NP_001331846.1  NP_001331847.1  NP_001331848.1  NP_568826.1  NP_851195.1  NP_974937.1 
Orthologous [Ortholog page] AT4G26650 (ath)  LOC103856982 (bra)  LOC103861645 (bra)  LOC103866428 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001190546.1)
nucl 10  (predict for NP_001331842.1)
nucl 10  (predict for NP_001331843.1)
nucl 10  (predict for NP_001331844.1)
nucl 10  (predict for NP_001331845.1)
nucl 10  (predict for NP_001331846.1)
nucl 10  (predict for NP_001331847.1)
nucl 10  (predict for NP_001331848.1)
nucl 10  (predict for NP_568826.1)
nucl 10  (predict for NP_851195.1)
nucl 10  (predict for NP_974937.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190546.1)
other 9  (predict for NP_001331842.1)
other 9  (predict for NP_001331843.1)
other 9  (predict for NP_001331844.1)
other 9  (predict for NP_001331845.1)
other 9  (predict for NP_001331846.1)
other 9  (predict for NP_001331847.1)
other 9  (predict for NP_001331848.1)
other 9  (predict for NP_568826.1)
other 9  (predict for NP_851195.1)
other 9  (predict for NP_974937.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
Genes directly connected with AT5G55550 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.7 AT5G09850 Transcription elongation factor (TFIIS) family protein [detail] 830845
5.4 XBAT32 uncharacterized protein [detail] 835882
5.3 LUH LEUNIG-like protein [detail] 817830
4.6 AT4G34750 SAUR-like auxin-responsive protein family [detail] 829627
Coexpressed
gene list		 [Coexpressed gene list for AT5G55550]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248063_at
248063_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248063_at
248063_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248063_at
248063_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835649      
Refseq ID (protein) NP_001190546.1 
NP_001331842.1 
NP_001331843.1 
NP_001331844.1 
NP_001331845.1 
NP_001331846.1 
NP_001331847.1 
NP_001331848.1 
NP_568826.1 
NP_851195.1 
NP_974937.1 


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