[←][→] ath   At5g55590 Gene
functional annotation
Function   Pectin lyase-like superfamily protein      
GO BP
GO:0045490 [list] [network] pectin catabolic process  (78 genes)  IMP  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0030599 [list] [network] pectinesterase activity  (16 genes)  IDA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (108 genes)
Protein NP_001331632.1  NP_200370.1 
BLAST NP_001331632.1  NP_200370.1 
Orthologous [Ortholog page] LOC4343861 (osa)  LOC7485105 (ppo)  LOC11427397 (mtr)  LOC100775690 (gma)  LOC100804220 (gma)  LOC100812850 (gma)  LOC100813382 (gma)  LOC101256106 (sly)  LOC103845005 (bra)  LOC103851871 (bra)  LOC104648548 (sly)  LOC112324147 (ppo)  LOC123044251 (tae)  LOC123052130 (tae)  LOC123187990 (tae)  LOC123425367 (hvu) 
Subcellular
localization
wolf
chlo 5,  extr 3,  chlo_mito 3  (predict for NP_001331632.1)
chlo 4,  extr 2,  vacu 2,  mito 1  (predict for NP_200370.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001331632.1)
scret 9  (predict for NP_200370.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
ath00040 Pentose and glucuronate interconversions 2
ath02010 ABC transporters 2
Genes directly connected with QRT1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 AT1G49960 Xanthine/uracil permease family protein [detail] 841419
6.9 AT5G20860 Plant invertase/pectin methylesterase inhibitor superfamily [detail] 832209
6.8 AT5G49350 Glycine-rich protein family [detail] 3771473
4.0 AT3G54310 DNA-directed RNA polymerase subunit alpha [detail] 824598
3.1 HOS10 high response to osmotic stress 10 [detail] 840446
Coexpressed
gene list		 [Coexpressed gene list for QRT1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248066_at
248066_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248066_at
248066_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248066_at
248066_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835653      
Refseq ID (protein) NP_001331632.1 
NP_200370.1 


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