[←][→] ath   At5g55660 Gene
functional annotation
Function   DEK domain-containing chromatin associated protein      
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_200377.1 
BLAST NP_200377.1 
Orthologous [Ortholog page] AT4G26630 (ath)  LOC18095375 (ppo)  LOC25489146 (mtr)  LOC100812631 (gma)  LOC100817467 (gma)  LOC100818537 (gma)  LOC101250613 (sly)  LOC101254244 (sly)  LOC103834839 (bra)  LOC103845017 (bra)  LOC103851868 (bra)  LOC103866403 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_200377.1)
Subcellular
localization
TargetP
other 8  (predict for NP_200377.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G55660 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
15.5 AT4G26630 DEK domain-containing chromatin associated protein [detail] 828770
13.8 LINC3 little nuclei3 [detail] 843210
11.4 PRP40A pre-mRNA-processing protein 40A [detail] 841057
10.5 AT4G08310 DNA ligase [detail] 826385
10.0 AT5G08450 zinc finger CCCH domain protein [detail] 830744
10.0 AT4G31880 transcriptional regulator [detail] 829318
9.6 AT5G46070 Guanylate-binding family protein [detail] 834648
9.0 ELF8 binding protein [detail] 815177
9.0 MBD10 methyl-CPG-binding domain 10 [detail] 838103
8.9 AT2G22795 uncharacterized protein [detail] 816810
8.9 FDM5 XH/XS domain-containing protein [detail] 844418
8.8 ATRX P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 837382
8.1 HOS15 WD-40 repeat family protein [detail] 836867
7.8 AT4G11560 bromo-adjacent homology (BAH) domain-containing protein [detail] 826760
6.5 RING1A RING 1A [detail] 834451
6.3 RIP2 ROP interactive partner 3 [detail] 818284
Coexpressed
gene list		 [Coexpressed gene list for AT5G55660]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248070_at
248070_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248070_at
248070_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248070_at
248070_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835660      
Refseq ID (protein) NP_200377.1 


The preparation time of this page was 0.2 [sec].