[←][→] ath   AT5G55720 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (24 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_200383.1 
BLAST NP_200383.1 
Orthologous [Ortholog page] LOC103851864 (bra) 
Subcellular
localization
wolf
chlo 6,  extr 3,  chlo_mito 3  (predict for NP_200383.1)
Subcellular
localization
TargetP
scret 8,  chlo 4  (predict for NP_200383.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 3
Genes directly connected with AT5G55720 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
22.0 AT5G33370 GDSL-like Lipase/Acylhydrolase superfamily protein [detail] 833315
16.4 CYP86A7 cytochrome P450, family 86, subfamily A, polypeptide 7 [detail] 842675
15.7 AT1G06100 Fatty acid desaturase family protein [detail] 837119
9.1 CYP86A4 cytochrome P450, family 86, subfamily A, polypeptide 4 [detail] 839347
8.2 SPL8 squamosa promoter binding protein-like 8 [detail] 839275
8.1 ABCB13 P-glycoprotein 13 [detail] 839687
7.1 ABCG13 ABC-2 type transporter family protein [detail] 841571
6.3 NADP-ME3 NADP-malic enzyme 3 [detail] 832657
Coexpressed
gene list		 [Coexpressed gene list for AT5G55720]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248073_at
248073_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248073_at
248073_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248073_at
248073_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835666      
Refseq ID (protein) NP_200383.1 


The preparation time of this page was 0.2 [sec].