[←][→] ath   AT5G56260 Gene
functional annotation
Function   Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase  
GO BP
GO:0051252 [list] [network] regulation of RNA metabolic process  (2060 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0008428 [list] [network] ribonuclease inhibitor activity  (3 genes)  IEA  
GO:0047443 [list] [network] 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity  (3 genes)  IEA  
GO:0008948 [list] [network] oxaloacetate decarboxylase activity  (9 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001331061.1  NP_001331062.1  NP_001331063.1  NP_001331064.1  NP_200437.1 
BLAST NP_001331061.1  NP_001331062.1  NP_001331063.1  NP_001331064.1  NP_200437.1 
Orthologous [Ortholog page] AT3G02770 (ath)  AT5G16450 (ath)  LOC4324667 (osa)  LOC7459221 (ppo)  LOC11410288 (mtr)  LOC11418846 (mtr)  LOC25485895 (mtr)  LOC100256628 (vvi)  LOC100263339 (vvi)  LOC100281920 (zma)  LOC100283919 (zma)  LOC100500019 (gma)  LOC100500691 (gma)  LOC100783612 (gma)  LOC101250931 (sly)  LOC101260124 (sly)  LOC103843584 (bra)  LOC103851838 (bra)  LOC103856197 (bra)  LOC103856943 (bra) 
Subcellular
localization
wolf
cyto 7,  plas 1,  E.R. 1,  cysk 1,  golg 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for NP_001331061.1)
cyto 8,  extr 1  (predict for NP_001331062.1)
cyto 8,  extr 1  (predict for NP_001331063.1)
cyto 7,  plas 1,  E.R. 1,  cysk 1,  golg 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for NP_001331064.1)
cyto 8,  extr 1  (predict for NP_200437.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_001331061.1)
other 6  (predict for NP_001331062.1)
other 6  (predict for NP_001331063.1)
scret 6  (predict for NP_001331064.1)
other 6  (predict for NP_200437.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT5G56260 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.3 PXN Mitochondrial substrate carrier family protein [detail] 818584
5.2 AT3G28480 Oxoglutarate/iron-dependent oxygenase [detail] 822478
4.8 AT5G37070 hypothetical protein (Protein of unknown function, DUF538) [detail] 833678
Coexpressed
gene list		 [Coexpressed gene list for AT5G56260]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
248007_at
248007_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
248007_at
248007_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
248007_at
248007_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835725      
Refseq ID (protein) NP_001331061.1 
NP_001331062.1 
NP_001331063.1 
NP_001331064.1 
NP_200437.1 


The preparation time of this page was 0.2 [sec].