ATTED-II : GeneID search result

[←][→] ath At5g56310 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO:0009790 [list] [network] embryo development	(780 genes)	IEA
GO:0048316 [list] [network] seed development	(1294 genes)	IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(4228 genes)

ISM

GO MF

KEGG

Protein

NP_200442.1

BLAST

NP_200442.1

Orthologous

[Ortholog page] LOC7463559 (ppo) LOC11421190 (mtr) LOC100808631 (gma) LOC101253313 (sly) LOC103856938 (bra) LOC112936120 (osa) LOC123061002 (tae) LOC123069591 (tae) LOC123078075 (tae) LOC123439767 (hvu)

Subcellular
localization
wolf

chlo 6, nucl 1, cyto 1, extr 1, E.R. 1, pero 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1

(predict for NP_200442.1)

Subcellular
localization
TargetP

mito 5

(predict for NP_200442.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT5G56310 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
10.8	SLO2	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	815845
10.5	AT5G42450	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	834252
10.4	AT3G08820	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	820029
9.9	AT5G61370	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	836258
9.1	AT1G80880	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	844428
8.3	AT5G44230	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	834446

Coexpressed
gene list

[Coexpressed gene list for AT5G56310]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

248012_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

248012_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

248012_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835730
Refseq ID (protein)	NP_200442.1

The preparation time of this page was 0.1 [sec].