[←][→] ath   AT5G56900 Gene
functional annotation
Function   CwfJ-like family protein / zinc finger (CCCH-type) family protein  
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001330052.1  NP_200500.2  NP_974945.2 
BLAST NP_001330052.1  NP_200500.2  NP_974945.2 
Orthologous [Ortholog page] LOC4346865 (osa)  LOC25494236 (mtr)  LOC100259266 (vvi)  LOC100383201 (zma)  LOC100782106 (gma)  LOC100809090 (gma)  LOC101243673 (sly)  LOC103845120 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001330052.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_200500.2)
nucl 4,  chlo 2,  cysk 2,  cyto_nucl 2,  nucl_plas 2  (predict for NP_974945.2)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for NP_001330052.1)
other 6,  mito 4  (predict for NP_200500.2)
mito 8  (predict for NP_974945.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G56900 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT3G04490 exportin-4 protein [detail] 819605
5.6 SWI3B switch subunit 3 [detail] 817927
5.4 AT5G63200 tetratricopeptide repeat (TPR)-containing protein [detail] 836441
4.6 PPT1 polyprenyltransferase 1 [detail] 828466
Coexpressed
gene list		 [Coexpressed gene list for AT5G56900]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247987_at
247987_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247987_at
247987_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247987_at
247987_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835792      
Refseq ID (protein) NP_001330052.1 
NP_200500.2 
NP_974945.2 


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