[←][→] ath   AT5G57030 Gene
functional annotation
Function   Lycopene beta/epsilon cyclase protein  
GO BP
GO:0016120 [list] [network] carotene biosynthetic process  (7 genes)  IBA IGI  
GO:0016123 [list] [network] xanthophyll biosynthetic process  (8 genes)  IBA IGI  
GO:0006744 [list] [network] ubiquinone biosynthetic process  (19 genes)  IBA  
GO:0016117 [list] [network] carotenoid biosynthetic process  (34 genes)  IMP  
GO:0009765 [list] [network] photosynthesis, light harvesting  (37 genes)  TAS  
GO CC
GO:0031969 [list] [network] chloroplast membrane  (259 genes)  IEA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM TAS  
GO MF
GO:0045435 [list] [network] lycopene epsilon cyclase activity  (1 genes)  IGI TAS  
GO:0016705 [list] [network] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen  (346 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IBA  
KEGG ath00906 [list] [network] Carotenoid biosynthesis (29 genes)
Protein NP_200513.1 
BLAST NP_200513.1 
Orthologous [Ortholog page] CrtL-e-1 (sly)  LOC4324196 (osa)  LOC11438775 (mtr)  LECY1 (vvi)  LOC100280448 (zma)  LOC100788180 (gma)  LOC100790686 (gma)  LOC103845139 (bra)  LOC103854515 (bra)  LOC103856778 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_200513.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for NP_200513.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 2
ath01200 Carbon metabolism 2
ath00480 Glutathione metabolism 2
ath00906 Carotenoid biosynthesis 2
ath00860 Porphyrin and chlorophyll metabolism 2
Genes directly connected with LUT2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 PSY PHYTOENE SYNTHASE [detail] 831587
7.0 AT2G34620 Mitochondrial transcription termination factor family protein [detail] 818027
6.4 POR C protochlorophyllide oxidoreductase C [detail] 839009
Coexpressed
gene list		 [Coexpressed gene list for LUT2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247936_at
247936_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247936_at
247936_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247936_at
247936_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835806      
Refseq ID (protein) NP_200513.1 


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