[][] ath   AT5G57540 Gene
functional annotation
Function   xyloglucan endotransglucosylase/hydrolase 13
GO BP
GO:0010411 [list] [network] xyloglucan metabolic process  (58 genes)  IDA  
GO:0042546 [list] [network] cell wall biogenesis  (231 genes)  IEA  
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO CC
GO:0048046 [list] [network] apoplast  (443 genes)  IEA  
GO:0005618 [list] [network] cell wall  (685 genes)  IEA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0033946 [list] [network] xyloglucan-specific endo-beta-1,4-glucanase activity  (7 genes)  IDA  
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity  (33 genes)  IDA  
KEGG
Protein NP_200562.1 
BLAST NP_200562.1 
Orthologous [Ortholog page] XTH12 (ath)LOC103845187 (bra)
Subcellular
localization
wolf
extr 6,  chlo 2,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for NP_200562.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_200562.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
Genes directly connected with XTH13 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
25.1 XTH12 xyloglucan endotransglucosylase/hydrolase 12 [detail] 835857
20.9 PRP1 proline-rich protein 1 [detail] 841938
19.5 RHS18 root hair specific 18 [detail] 832302
19.2 FLA6 FASCICLIN-like arabinogalactan 6 [detail] 816574
18.9 XTH26 xyloglucan endotransglucosylase/hydrolase 26 [detail] 829006
13.2 MRH6 Adenine nucleotide alpha hydrolases-like superfamily protein [detail] 814899
11.3 PPa3 pyrophosphorylase 3 [detail] 819299
10.9 RHS14 root hair specific 14 [detail] 828297
10.8 AT3G07070 Protein kinase superfamily protein [detail] 819893
10.1 ROPGEF12 RHO guanyl-nucleotide exchange factor 12 [detail] 844325
Coexpressed
gene list
[Coexpressed gene list for XTH13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247914_at
247914_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247914_at
247914_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
247914_at
247914_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 835858    
Refseq ID (protein) NP_200562.1 


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