functional annotation |
Function |
xyloglucan endotransglucosylase/hydrolase 13 |
|
GO BP |
GO:0010411 [list] [network] xyloglucan metabolic process
|
(58 genes)
|
IDA
|
|
GO:0042546 [list] [network] cell wall biogenesis
|
(231 genes)
|
IEA
|
|
GO:0071555 [list] [network] cell wall organization
|
(538 genes)
|
IEA
|
|
|
GO CC |
GO:0048046 [list] [network] apoplast
|
(443 genes)
|
IEA
|
|
GO:0005618 [list] [network] cell wall
|
(685 genes)
|
IEA
|
|
GO:0005576 [list] [network] extracellular region
|
(3363 genes)
|
ISM
|
|
|
GO MF |
GO:0033946 [list] [network] xyloglucan-specific endo-beta-1,4-glucanase activity
|
(7 genes)
|
IDA
|
|
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity
|
(33 genes)
|
IDA
|
|
|
KEGG |
|
|
Protein |
NP_200562.1
|
BLAST |
NP_200562.1
|
Orthologous |
[Ortholog page]
XTH12 (ath)
LOC103845187 (bra)
|
Subcellular localization wolf |
extr 6,
chlo 2,
nucl 1,
cyto 1,
mito 1,
cyto_nucl 1
|
(predict for NP_200562.1)
|
|
Subcellular localization TargetP |
scret 9
|
(predict for NP_200562.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath00940 |
Phenylpropanoid biosynthesis |
3 |
|
Genes directly connected with XTH13 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
25.1 |
XTH12 |
xyloglucan endotransglucosylase/hydrolase 12 |
[detail] |
835857 |
20.9 |
PRP1 |
proline-rich protein 1 |
[detail] |
841938 |
19.5 |
RHS18 |
root hair specific 18 |
[detail] |
832302 |
19.2 |
FLA6 |
FASCICLIN-like arabinogalactan 6 |
[detail] |
816574 |
18.9 |
XTH26 |
xyloglucan endotransglucosylase/hydrolase 26 |
[detail] |
829006 |
13.2 |
MRH6 |
Adenine nucleotide alpha hydrolases-like superfamily protein |
[detail] |
814899 |
11.3 |
PPa3 |
pyrophosphorylase 3 |
[detail] |
819299 |
10.9 |
RHS14 |
root hair specific 14 |
[detail] |
828297 |
10.8 |
AT3G07070 |
Protein kinase superfamily protein |
[detail] |
819893 |
10.1 |
ROPGEF12 |
RHO guanyl-nucleotide exchange factor 12 |
[detail] |
844325 |
|
Coexpressed gene list |
[Coexpressed gene list for XTH13]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
247914_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
247914_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
247914_at
X axis is samples (xls file), and Y axis is log-expression.
|