ATTED-II : GeneID search result

[←][→] ath At5g57970 Gene

functional annotation

Function

DNA glycosylase superfamily protein

GO BP

GO:0006284 [list] [network] base-excision repair

(16 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(10305 genes)

ISM

GO MF

GO:0008725 [list] [network] DNA-3-methyladenine glycosylase activity

(8 genes)

IEA

KEGG

ath03410 [list] [network] Base excision repair (41 genes)

Protein

NP_001032091.1 NP_200605.1

BLAST

NP_001032091.1 NP_200605.1

Orthologous

[Ortholog page] LOC4336309 (osa) LOC7465959 (ppo) LOC7493231 (ppo) LOC7493396 (ppo) LOC11433926 (mtr) LOC11439558 (mtr) LOC100783263 (gma) LOC100785912 (gma) LOC100801026 (gma) LOC100805836 (gma) LOC100814780 (gma) LOC101247118 (sly) LOC101267869 (sly) LOC103830461 (bra) LOC123045938 (tae) LOC123053805 (tae) LOC123189662 (tae) LOC123427150 (hvu)

Subcellular
localization
wolf

nucl 5, cyto 2, mito 1, plas 1, pero 1, cysk 1, cysk_plas 1, mito_plas 1	(predict for NP_001032091.1)
nucl 5, cyto 2, mito 1, plas 1, pero 1, cysk 1, cysk_plas 1, mito_plas 1	(predict for NP_200605.1)

Subcellular
localization
TargetP

chlo 7, other 3	(predict for NP_001032091.1)
chlo 7, other 3	(predict for NP_200605.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00100	Steroid biosynthesis	2

Genes directly connected with AT5G57970 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.2	AT3G15940	UDP-Glycosyltransferase superfamily protein	[detail]	820838
5.1	AT5G57700	BNR/Asp-box repeat family protein	[detail]	835877
5.1	AT1G19710	UDP-Glycosyltransferase superfamily protein	[detail]	838559
4.6	AT3G61610	Galactose mutarotase-like superfamily protein	[detail]	825334

Coexpressed
gene list

[Coexpressed gene list for AT5G57970]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247892_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247892_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247892_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	835908
Refseq ID (protein)	NP_001032091.1
Refseq ID (protein)	NP_200605.1

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