[←][→] ath   AT5G57970 Gene
functional annotation
Function   DNA glycosylase superfamily protein  
GO BP
GO:0006284 [list] [network] base-excision repair  (25 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008725 [list] [network] DNA-3-methyladenine glycosylase activity  (8 genes)  IEA  
KEGG ath03410 [list] [network] Base excision repair (43 genes)
Protein NP_001032091.1  NP_200605.1 
BLAST NP_001032091.1  NP_200605.1 
Orthologous [Ortholog page] LOC4336309 (osa)  LOC7465959 (ppo)  LOC7493396 (ppo)  LOC11433926 (mtr)  LOC11439558 (mtr)  LOC100216672 (zma)  LOC100258710 (vvi)  LOC100267363 (vvi)  LOC100783263 (gma)  LOC100785912 (gma)  LOC100801026 (gma)  LOC100805836 (gma)  LOC100814780 (gma)  LOC101247118 (sly)  LOC101267869 (sly)  LOC103641812 (zma)  LOC103830461 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 2,  mito 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001032091.1)
nucl 5,  cyto 2,  mito 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for NP_200605.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for NP_001032091.1)
chlo 7,  other 3  (predict for NP_200605.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT5G57970 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.4 AT3G61610 Galactose mutarotase-like superfamily protein [detail] 825334
5.0 AT3G15940 UDP-Glycosyltransferase superfamily protein [detail] 820838
4.7 SRF8 STRUBBELIG-receptor family 8 [detail] 828302
4.0 AT1G48280 hydroxyproline-rich glycoprotein family protein [detail] 841248
Coexpressed
gene list		 [Coexpressed gene list for AT5G57970]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247892_at
247892_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247892_at
247892_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247892_at
247892_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835908      
Refseq ID (protein) NP_001032091.1 
NP_200605.1 


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