[←][→] ath   At5g58020 Gene
functional annotation
Function   RTF2 RING-finger protein      
GO BP
GO:1902979 [list] [network] mitotic DNA replication termination  (1 genes)  IEA  
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome  (10 genes)  IMP  
GO CC
GO MF
KEGG
Protein NP_200610.1 
BLAST NP_200610.1 
Orthologous [Ortholog page] LOC4340324 (osa)  LOC7485230 (ppo)  LOC7493405 (ppo)  LOC11427118 (mtr)  LOC100779501 (gma)  LOC100790159 (gma)  LOC101261532 (sly)  LOC103845240 (bra)  LOC103851666 (bra)  LOC123155648 (tae)  LOC123166049 (tae)  LOC123407660 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 2,  nucl_plas 2  (predict for NP_200610.1)
Subcellular
localization
TargetP
scret 1  (predict for NP_200610.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 5
ath03040 Spliceosome 4
Genes directly connected with AT5G58020 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.1 AT3G19950 RING/U-box superfamily protein [detail] 821533
6.5 CSP3 cold shock domain protein 3 [detail] 816297
6.4 RHC2A RING-H2 finger C2A [detail] 818556
5.9 ERF1-1 eukaryotic release factor 1-1 [detail] 834839
5.6 AT5G64230 1,8-cineole synthase [detail] 836544
5.0 TOPP4 type one serine/threonine protein phosphatase 4 [detail] 818571
Coexpressed
gene list		 [Coexpressed gene list for AT5G58020]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247840_at
247840_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247840_at
247840_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247840_at
247840_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835914      
Refseq ID (protein) NP_200610.1 


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