[←][→] ath   AT5G58230 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:2000653 [list] [network] regulation of genetic imprinting  (3 genes)  IDA  
GO:0031507 [list] [network] heterochromatin assembly  (5 genes)  IMP  
GO:0070828 [list] [network] heterochromatin organization  (9 genes)  IMP  
GO:0006349 [list] [network] regulation of gene expression by genetic imprinting  (14 genes)  IPI  
GO:0045787 [list] [network] positive regulation of cell cycle  (36 genes)  IGI  
GO:0010214 [list] [network] seed coat development  (44 genes)  IMP  
GO:0010026 [list] [network] trichome differentiation  (83 genes)  IMP  
GO:0006260 [list] [network] DNA replication  (120 genes)  IEA  
GO:0009909 [list] [network] regulation of flower development  (157 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IGI IMP  
GO:0048366 [list] [network] leaf development  (338 genes)  IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO:0048316 [list] [network] seed development  (717 genes)  IMP  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IMP  
GO CC
GO:0005677 [list] [network] chromatin silencing complex  (7 genes)  IDA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM TAS  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_200631.1 
BLAST NP_200631.1 
Orthologous [Ortholog page] LOC542545 (zma)  MSI1 (sly)  LOC4333540 (osa)  LOC7469389 (ppo)  LOC7481463 (ppo)  LOC11407768 (mtr)  LOC100127416 (gma)  LOC100247592 (vvi)  LOC100796217 (gma)  LOC103628047 (zma)  LOC103643702 (zma)  LOC103845251 (bra)  LOC103856707 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for NP_200631.1)
Subcellular
localization
TargetP
other 9  (predict for NP_200631.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with MSI1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 SYNC1 Class II aminoacyl-tRNA and biotin synthetases superfamily protein [detail] 835769
7.3 CSN5A COP9 signalosome 5A [detail] 838899
6.7 UCH2 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 [detail] 842876
6.3 ARP7 actin-related protein 7 [detail] 825254
6.0 AT4G37210 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 829875
6.0 RAD52-1 cobalt ion binding protein [detail] 843472
5.9 NRPB3 DNA-directed RNA polymerase family protein [detail] 816035
5.5 HGPT Hypoxanthine-guanine phosphoribosyltransferase [detail] 843505
4.8 AT1G72340 NagB/RpiA/CoA transferase-like superfamily protein [detail] 843566
Coexpressed
gene list		 [Coexpressed gene list for MSI1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247821_at
247821_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247821_at
247821_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247821_at
247821_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835935      
Refseq ID (protein) NP_200631.1 


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