| functional annotation |
| Function |
oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor |
|
| GO BP |
|
GO:0010258 [list] [network] NADH dehydrogenase complex (plastoquinone) assembly
|
(5 genes)
|
IMP
|
 |
|
GO:0009817 [list] [network] defense response to fungus, incompatible interaction
|
(50 genes)
|
IDA
|
|
|
GO:0055114 [list] [network] oxidation-reduction process
|
(1468 genes)
|
IEA
|
|
|
| GO CC |
|
| GO MF |
|
GO:0048038 [list] [network] quinone binding
|
(18 genes)
|
IEA
|
|
|
GO:0016655 [list] [network] oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
|
(30 genes)
|
IEA
|
|
|
| KEGG |
|
|
| Protein |
NP_001119457.1
NP_200634.1
|
| BLAST |
NP_001119457.1
NP_200634.1
|
| Orthologous |
[Ortholog page]
LOC4324998 (osa)
LOC7464751 (ppo)
LOC11411228 (mtr)
LOC100192546 (zma)
LOC100248423 (vvi)
LOC100777422 (gma)
LOC100811620 (gma)
LOC101265478 (sly)
LOC103856705 (bra)
|
Subcellular
localization
wolf |
|
chlo 5,
cyto 2,
plas 2,
cyto_plas 2
|
(predict for NP_001119457.1)
|
|
chlo 8,
plas 1
|
(predict for NP_200634.1)
|
|
Subcellular
localization
TargetP |
|
chlo 6
|
(predict for NP_001119457.1)
|
|
chlo 6
|
(predict for NP_200634.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00195 |
Photosynthesis |
2 |
 |
Genes directly connected with NdhN on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 12.7 |
PnsL2 |
PsbQ-like 2 |
[detail] |
837974 |
| 12.1 |
NdhU |
Chaperone DnaJ-domain superfamily protein |
[detail] |
832247 |
| 11.5 |
PnsB1 |
NDH-dependent cyclic electron flow 1 |
[detail] |
838168 |
| 11.4 |
PnsB3 |
NDH-dependent cyclic electron flow 1 |
[detail] |
820871 |
| 11.2 |
PnsL3 |
PsbQ-like 1 |
[detail] |
821143 |
| 11.1 |
Lhca6 |
PSI type II chlorophyll a/b-binding protein (Lhca2*1) |
[detail] |
838498 |
| 10.9 |
PnsL1 |
PsbP-like protein 2 |
[detail] |
818532 |
| 10.5 |
AT4G12830 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
826895 |
| 10.1 |
NdhL |
inorganic carbon transport protein-like protein |
[detail] |
843413 |
| 10.0 |
AT1G64680 |
beta-carotene isomerase D27 |
[detail] |
842776 |
| 9.2 |
CRR3 |
chlororespiratory reduction 3 |
[detail] |
814688 |
| 9.2 |
NdhM |
subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex |
[detail] |
3770591 |
| 8.6 |
PnsL4 |
FK506-binding protein 16-2 |
[detail] |
830126 |
| 8.6 |
AT1G27480 |
alpha/beta-Hydrolases superfamily protein |
[detail] |
839639 |
| 8.5 |
CP12-2 |
CP12 domain-containing protein 2 |
[detail] |
825414 |
| 8.3 |
CRR42 |
DUF3148 family protein |
[detail] |
832218 |
| 7.4 |
PnsB2 |
NDH-dependent cyclic electron flow 1 |
[detail] |
842785 |
| 7.1 |
AT4G21445 |
receptor-interacting protein |
[detail] |
825893 |
| 6.8 |
AT5G62840 |
Phosphoglycerate mutase family protein |
[detail] |
836405 |
| 6.8 |
NdhO |
NAD(P)H:plastoquinone dehydrogenase complex subunit O |
[detail] |
843827 |
| 6.3 |
AT1G50732 |
transmembrane protein |
[detail] |
10723115 |
| 4.8 |
AT1G49990 |
F-box family protein |
[detail] |
841423 |
|
Coexpressed
gene list |
[Coexpressed gene list for NdhN]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
247816_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
247816_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
247816_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT5G58260 Gene
