[←][→] ath   At5g58340 Gene
functional annotation
Function   myb-like HTH transcriptional regulator family protein      
GO BP
GO:0009642 [list] [network] response to light intensity  (373 genes)  IEA  
GO:0009409 [list] [network] response to cold  (472 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO MF
KEGG
Protein NP_001190566.1  NP_200642.2 
BLAST NP_001190566.1  NP_200642.2 
Orthologous [Ortholog page] TRFL5 (ath)  LOC4340310 (osa)  LOC4344404 (osa)  LOC7464725 (ppo)  LOC11418218 (mtr)  LOC11418225 (mtr)  LOC25482993 (mtr)  LOC25491076 (mtr)  LOC100777809 (gma)  LOC100791258 (gma)  LOC100811657 (gma)  LOC100819448 (gma)  LOC101245372 (sly)  LOC103845260 (bra)  LOC103860633 (bra)  LOC103870865 (bra)  LOC112419918 (mtr)  LOC113002420 (gma)  LOC123043484 (tae)  LOC123051344 (tae)  LOC123151846 (tae)  LOC123159057 (tae)  LOC123165456 (tae)  LOC123187298 (tae)  LOC123411706 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 4,  mito 1,  plas 1,  pero 1,  mito_plas 1  (predict for NP_001190566.1)
cyto 4,  nucl 4,  mito 1,  plas 1,  pero 1,  mito_plas 1  (predict for NP_200642.2)
Subcellular
localization
TargetP
other 5  (predict for NP_001190566.1)
other 5  (predict for NP_200642.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G58340 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
4.6 WNK4 with no lysine (K) kinase 4 [detail] 835947
4.1 AT2G42330 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein [detail] 818834
4.0 AT1G72275 LOW protein: nuclease-like protein [detail] 28717417
Coexpressed
gene list		 [Coexpressed gene list for AT5G58340]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247803_at
247803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247803_at
247803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247803_at
247803_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 835946      
Refseq ID (protein) NP_001190566.1 
NP_200642.2 


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