[←][→] ath   AT5G60250 Gene
functional annotation
Function   zinc finger (C3HC4-type RING finger) family protein  
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (38 genes)  IBA  
GO:0000209 [list] [network] protein polyubiquitination  (71 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004523 [list] [network] RNA-DNA hybrid ribonuclease activity  (39 genes)  IEA  
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (43 genes)  IBA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
KEGG
Protein NP_200833.1 
BLAST NP_200833.1 
Orthologous [Ortholog page] AT2G21420 (ath)  AT2G25360 (ath)  AT2G25370 (ath)  AT3G45470 (ath)  AT3G45555 (ath)  AT5G37560 (ath)  AT2G26135 (ath)  LOC7487342 (ppo)  LOC100191809 (zma)  LOC100241711 (vvi)  RTRP2 (gma)  LOC100790037 (gma)  LOC101251588 (sly)  LOC103828613 (bra)  LOC103842189 (bra)  LOC103845437 (bra)  LOC103845438 (bra)  LOC103851782 (bra)  LOC103856575 (bra)  LOC103873416 (bra)  LOC112420731 (mtr) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for NP_200833.1)
Subcellular
localization
TargetP
other 5  (predict for NP_200833.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
Genes directly connected with AT5G60250 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 GMI1 gamma-irradiation and mitomycin c induced 1 [detail] 832495
5.5 PARP2 poly(ADP-ribose) polymerase [detail] 828049
5.3 TRFL10 TRF-like 10 [detail] 831726
5.1 AT4G22960 FAM63A-like protein (DUF544) [detail] 828395
Coexpressed
gene list		 [Coexpressed gene list for AT5G60250]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247615_at
247615_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247615_at
247615_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247615_at
247615_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836147      
Refseq ID (protein) NP_200833.1 


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