[←][→] ath   At5g60570 Gene
functional annotation
Function   Galactose oxidase/kelch repeat superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0030163 [list] [network] protein catabolic process  (321 genes)  IEA  
GO:0051301 [list] [network] cell division  (442 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO:0006952 [list] [network] defense response  (2370 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
KEGG
Protein NP_001331512.1  NP_001331513.1  NP_200865.1 
BLAST NP_001331512.1  NP_001331513.1  NP_200865.1 
Orthologous [Ortholog page] LOC7491076 (ppo)  LOC7493898 (ppo)  LOC9270188 (osa)  LOC25487806 (mtr)  LOC100778680 (gma)  LOC100792139 (gma)  LOC100813839 (gma)  LOC100820005 (gma)  LOC101255559 (sly)  LOC103845472 (bra)  LOC123046736 (tae)  LOC123054588 (tae)  LOC123190452 (tae)  LOC123427808 (hvu) 
Subcellular
localization
wolf
cyto 6,  cyto_nucl 4,  nucl 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001331512.1)
cyto 6,  cyto_nucl 4,  nucl 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_001331513.1)
cyto 6,  cyto_nucl 4,  nucl 1,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for NP_200865.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_001331512.1)
chlo 4  (predict for NP_001331513.1)
chlo 4  (predict for NP_200865.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G60570 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 AT1G74510 Galactose oxidase/kelch repeat superfamily protein [detail] 843792
7.5 XYLT beta-1,2-xylosyltransferase [detail] 835643
7.3 AT3G07810 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 819972
6.5 AT4G33890 transcriptional regulator of RNA polII, SAGA, subunit [detail] 829532
6.2 AT5G09850 Transcription elongation factor (TFIIS) family protein [detail] 830845
5.6 AFB2 auxin signaling F-box 2 [detail] 822296
Coexpressed
gene list		 [Coexpressed gene list for AT5G60570]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247636_at
247636_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247636_at
247636_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247636_at
247636_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836178      
Refseq ID (protein) NP_001331512.1 
NP_001331513.1 
NP_200865.1 


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