[][] ath   At5g62090 Gene
functional annotation
Function   SEUSS-like 2
GO BP
GO:1901001 [list] [network] negative regulation of response to salt stress  (14 genes)  IMP  
GO:0010044 [list] [network] response to aluminum ion  (16 genes)  IMP  
GO:0047484 [list] [network] regulation of response to osmotic stress  (47 genes)  IMP  
GO:0048481 [list] [network] plant ovule development  (60 genes)  IMP  
GO:0048467 [list] [network] gynoecium development  (101 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001332402.1  NP_201015.1  NP_851245.1 
BLAST NP_001332402.1  NP_201015.1  NP_851245.1 
Orthologous [Ortholog page] LOC547529 (gma)SLK3 (ath)SLK1 (ath)LOC4339967 (osa)LOC7454480 (ppo)LOC18103960 (ppo)LOC100789452 (gma)LOC100816886 (gma)SEU2 (sly)LOC103834866 (bra)LOC103854973 (bra)LOC103861563 (bra)LOC103861564 (bra)LOC120575899 (mtr)LOC123088304 (tae)LOC123148417 (tae)LOC123149570 (tae)LOC123154264 (tae)LOC123156101 (tae)LOC123162671 (tae)LOC123163775 (tae)LOC123164980 (tae)LOC123170495 (tae)LOC123412891 (hvu)LOC123413483 (hvu)LOC123413641 (hvu)
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001332402.1)
nucl 9,  cyto_nucl 5  (predict for NP_201015.1)
nucl 9,  cyto_nucl 5  (predict for NP_851245.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001332402.1)
other 7,  chlo 5  (predict for NP_201015.1)
other 7,  chlo 5  (predict for NP_851245.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SLK2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.5 AT5G22450 spectrin beta chain, brain [detail] 832306
5.5 SLK1 SEUSS-like 1 [detail] 828657
5.4 AT1G07870 Protein kinase superfamily protein [detail] 837302
Coexpressed
gene list
[Coexpressed gene list for SLK2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247466_at
247466_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247466_at
247466_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
247466_at
247466_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 836329    
Refseq ID (protein) NP_001332402.1 
NP_201015.1 
NP_851245.1 


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