[←][→] ath   AT5G62640 Gene
functional annotation
Function   proline-rich family protein  
GO BP
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (63 genes)  IMP  
GO:0048573 [list] [network] photoperiodism, flowering  (67 genes)  IMP  
GO:0009908 [list] [network] flower development  (447 genes)  IEA  
GO:0006396 [list] [network] RNA processing  (831 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
KEGG
Protein NP_001032126.1  NP_001154791.1  NP_201070.1 
BLAST NP_001032126.1  NP_001154791.1  NP_201070.1 
Orthologous [Ortholog page] LOC4342632 (osa)  LOC7484452 (ppo)  LOC25481083 (mtr)  LOC25493796 (mtr)  LOC25493797 (mtr)  LOC100192510 (zma)  LOC100251842 (vvi)  LOC100792892 (gma)  LOC101248017 (sly)  LOC103632088 (zma)  LOC103874703 (bra) 
Subcellular
localization
wolf
nucl 9,  plas 1  (predict for NP_001032126.1)
nucl 9,  plas 1  (predict for NP_001154791.1)
nucl 9,  plas 1  (predict for NP_201070.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001032126.1)
other 6,  chlo 4  (predict for NP_001154791.1)
other 8  (predict for NP_201070.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 RNA transport 3
ath04144 Endocytosis 2
Genes directly connected with ELF5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 MAC5A CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein [detail] 837248
9.1 AT5G14540 basic salivary proline-rich-like protein (DUF1421) [detail] 831305
8.6 ELF7 hydroxyproline-rich glycoprotein family protein [detail] 844312
8.1 TAF12 TBP-associated factor 12 [detail] 820168
7.5 AT4G37130 hydroxyproline-rich glycoprotein family protein [detail] 829867
7.5 AT2G32600 hydroxyproline-rich glycoprotein family protein [detail] 817820
6.8 AT4G23040 Ubiquitin-like superfamily protein [detail] 828403
5.5 RGLG1 RING domain ligase1 [detail] 819911
Coexpressed
gene list		 [Coexpressed gene list for ELF5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247445_at
247445_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247445_at
247445_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247445_at
247445_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836385      
Refseq ID (protein) NP_001032126.1 
NP_001154791.1 
NP_201070.1 


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