[←][→] ath   At5g62790 Gene
functional annotation
Function   1-deoxy-D-xylulose 5-phosphate reductoisomerase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019288 [list] [network] isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway  (8 genes)  IDA IEA TAS  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (163 genes)  TAS  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0030604 [list] [network] 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity  (1 genes)  IDA  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
Protein NP_001190600.1  NP_201085.1 
BLAST NP_001190600.1  NP_201085.1 
Orthologous [Ortholog page] DXR (sly)  LOC4326153 (osa)  LOC7457738 (ppo)  LOC7483502 (ppo)  LOC11438073 (mtr)  LOC25500270 (mtr)  LOC100784845 (gma)  DXR1 (gma)  DXR2 (gma)  LOC103837427 (bra)  LOC103874719 (bra)  LOC123068145 (tae)  LOC123083354 (tae)  LOC123150893 (tae)  LOC123166476 (tae)  LOC123172048 (tae)  LOC123172496 (tae)  LOC123442344 (hvu) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1,  vacu 1  (predict for NP_001190600.1)
cyto 5,  chlo 4,  mito 1,  vacu 1  (predict for NP_201085.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001190600.1)
chlo 7  (predict for NP_201085.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00906 Carotenoid biosynthesis 2
Genes directly connected with DXR on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 PGR5-LIKE A PGR5-LIKE A [detail] 828388
7.0 ZDS zeta-carotene desaturase [detail] 819647
6.9 AT2G42130 Plastid-lipid associated protein PAP / fibrillin family protein [detail] 818813
4.8 AT4G33110 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 829448
Coexpressed
gene list		 [Coexpressed gene list for DXR]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247401_at
247401_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247401_at
247401_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247401_at
247401_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836400      
Refseq ID (protein) NP_001190600.1 
NP_201085.1 


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