[←][→] ath   At5g63080 Gene
functional annotation
Function   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0070079 [list] [network] histone H4-R3 demethylation  (2 genes)  IDA  
GO:0043985 [list] [network] histone H4-R3 methylation  (3 genes)  IGI  
GO:0010030 [list] [network] positive regulation of seed germination  (23 genes)  IGI IMP  
GO:0010099 [list] [network] regulation of photomorphogenesis  (39 genes)  IMP  
GO:0010476 [list] [network] gibberellin mediated signaling pathway  (50 genes)  IMP  
GO:0010114 [list] [network] response to red light  (101 genes)  IEP IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0033746 [list] [network] histone H3R2 demethylase activity  (1 genes)  IDA  
GO:0033749 [list] [network] histone H3R3 demethylase activity  (1 genes)  IDA  
GO:0000987 [list] [network] cis-regulatory region sequence-specific DNA binding  (49 genes)  IDA  
KEGG
Protein NP_201113.2 
BLAST NP_201113.2 
Orthologous [Ortholog page] LOC4326179 (osa)  LOC7457758 (ppo)  LOC11438488 (mtr)  JJH1 (sly)  LOC100803814 (gma)  LOC103837450 (bra)  LOC123061276 (tae)  LOC123069813 (tae)  LOC123078274 (tae)  LOC123443727 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_201113.2)
Subcellular
localization
TargetP
other 8  (predict for NP_201113.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Genes directly connected with AT5G63080 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.9 ERA1 Prenyltransferase family protein [detail] 834026
6.1 CTC1 conserved telomere maintenance component 1 [detail] 826554
6.0 AT3G04970 DHHC-type zinc finger family protein [detail] 819657
5.5 AT3G27610 Nucleotidylyl transferase superfamily protein [detail] 822383
Coexpressed
gene list		 [Coexpressed gene list for AT5G63080]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247419_at
247419_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247419_at
247419_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247419_at
247419_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836428      
Refseq ID (protein) NP_201113.2 


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