ATTED-II : GeneID search result

[←][→] ath At5g63440 Gene

functional annotation

Function

hypothetical protein (DUF167)

GO BP

GO:0097167 [list] [network] circadian regulation of translation	(1 genes)	IMP
GO:2000306 [list] [network] positive regulation of photomorphogenesis	(8 genes)	IGI IMP
GO:0009640 [list] [network] photomorphogenesis	(80 genes)	IMP

GO CC

GO:0009507 [list] [network] chloroplast	(5004 genes)	ISM
GO:0005634 [list] [network] nucleus	(10305 genes)	IDA ISM

GO MF

GO:0005515 [list] [network] protein binding

(5066 genes)

IPI

KEGG

Protein

NP_001078789.1 NP_568972.2 NP_851256.1

BLAST

NP_001078789.1 NP_568972.2 NP_851256.1

Orthologous

[Ortholog page] LOC4342960 (osa) LOC7463120 (ppo) LOC7484469 (ppo) LOC100306581 (gma) LOC101262801 (sly) LOC103873755 (bra) LOC112417490 (mtr) LOC123043726 (tae) LOC123051582 (tae) LOC123187518 (tae) LOC123424746 (hvu)

Subcellular
localization
wolf

chlo 8, plas 1	(predict for NP_001078789.1)
chlo 3, plas 3, mito 1, pero 1, golg_plas 1, cysk_plas 1, E.R._plas 1, cyto_plas 1	(predict for NP_568972.2)
chlo 3, cyto 3, plas 2, nucl 1, mito 1, pero 1	(predict for NP_851256.1)

Subcellular
localization
TargetP

chlo 4, other 4	(predict for NP_001078789.1)
other 9	(predict for NP_568972.2)
other 9	(predict for NP_851256.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

Genes directly connected with AT5G63440 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.2	TEX1	Transducin/WD40 repeat-like superfamily protein	[detail]	835712
6.1	AT3G09890	Ankyrin repeat family protein	[detail]	820147
5.9	AT5G50410	ribonucleoside-diphosphate reductase subunit beta	[detail]	835109

Coexpressed
gene list

[Coexpressed gene list for AT5G63440]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

247332_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

247332_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

247332_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	836463
Refseq ID (protein)	NP_001078789.1
	NP_568972.2
	NP_851256.1

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