[←][→] ath   AT5G63960 Gene
functional annotation
Function   DNA polymerase delta subunit 1  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (81 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0000166 [list] [network] nucleotide binding  (2618 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03030 [list] [network] DNA replication (50 genes)
ath03410 [list] [network] Base excision repair (43 genes)
ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath03430 [list] [network] Mismatch repair (39 genes)
ath03440 [list] [network] Homologous recombination (67 genes)
Protein NP_001190611.1  NP_201201.2 
BLAST NP_001190611.1  NP_201201.2 
Orthologous [Ortholog page] POLD1 (gma)  LOC4349968 (osa)  LOC7466858 (ppo)  LOC25489857 (mtr)  LOC100246530 (vvi)  LOC100817379 (gma)  LOC101256637 (sly)  LOC103654581 (zma)  LOC103873814 (bra) 
Subcellular
localization
wolf
nucl 5,  mito 3,  chlo 2  (predict for NP_001190611.1)
nucl 4,  chlo 3,  mito 3,  chlo_mito 3  (predict for NP_201201.2)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for NP_001190611.1)
mito 4,  other 3  (predict for NP_201201.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 3
ath04120 Ubiquitin mediated proteolysis 3
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 2
Genes directly connected with AT5G63960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 MIM P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 836267
8.6 TIL1 DNA polymerase epsilon catalytic subunit [detail] 837346
8.2 ORC4 origin recognition complex subunit 4 [detail] 814641
7.5 MSH3 homolog of DNA mismatch repair protein MSH3 [detail] 828659
6.8 APC4 Transducin/WD40 repeat-like superfamily protein [detail] 828238
6.4 BIO1 adenosylmethionine-8-amino-7-oxononanoate transaminase [detail] 835863
5.8 ATR Ataxia telangiectasia-mutated and RAD3-like protein [detail] 834082
Coexpressed
gene list		 [Coexpressed gene list for AT5G63960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247311_at
247311_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247311_at
247311_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247311_at
247311_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836517      
Refseq ID (protein) NP_001190611.1 
NP_201201.2 


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