[←][→] ath   AT5G64420 Gene
functional annotation
Function   DNA polymerase V family  
GO BP
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (477 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008134 [list] [network] transcription factor binding  (173 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
KEGG
Protein NP_201247.1 
BLAST NP_201247.1 
Orthologous [Ortholog page] LOC4328227 (osa)  LOC7478774 (ppo)  LOC11419794 (mtr)  LOC100268096 (vvi)  LOC100787296 (gma)  LOC100803141 (gma)  LOC101264257 (sly)  LOC101264560 (sly)  LOC103626594 (zma)  LOC103873865 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  nucl_plas 3  (predict for NP_201247.1)
Subcellular
localization
TargetP
other 9  (predict for NP_201247.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
Genes directly connected with AT5G64420 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.9 AT3G06530 ARM repeat superfamily protein [detail] 819831
11.4 NRPA2 nuclear RNA polymerase A2 [detail] 839872
11.2 AT2G40360 Transducin/WD40 repeat-like superfamily protein [detail] 818629
9.4 CARB carbamoyl phosphate synthetase B [detail] 839868
8.5 MTR4 RNA helicase, ATP-dependent, SK12/DOB1 protein [detail] 842269
8.0 DDB1B damaged DNA binding protein 1B [detail] 827857
6.9 DEG9 DegP protease 9 [detail] 834018
6.2 MEE22 maternal effect embryo arrest 22 [detail] 818043
5.3 THO5 THO complex, subunit 5 [detail] 834304
Coexpressed
gene list		 [Coexpressed gene list for AT5G64420]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247277_at
247277_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247277_at
247277_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247277_at
247277_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836563      
Refseq ID (protein) NP_201247.1 


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