| functional annotation |
| Function |
ABC2 homolog 13 |
|
| GO BP |
|
GO:1901031 [list] [network] regulation of response to reactive oxygen species
|
(3 genes)
|
IMP
|
 |
|
GO:1990641 [list] [network] response to iron ion starvation
|
(17 genes)
|
IEP
|
|
|
GO:0034599 [list] [network] cellular response to oxidative stress
|
(43 genes)
|
IGI
IMP
|
|
|
GO:0055072 [list] [network] iron ion homeostasis
|
(50 genes)
|
IMP
|
|
|
GO:0046467 [list] [network] membrane lipid biosynthetic process
|
(57 genes)
|
IMP
|
|
|
GO:0042542 [list] [network] response to hydrogen peroxide
|
(62 genes)
|
IMP
|
|
|
GO:0009644 [list] [network] response to high light intensity
|
(65 genes)
|
IMP
|
|
|
GO:0046686 [list] [network] response to cadmium ion
|
(90 genes)
|
IEP
IMP
|
|
|
GO:0007623 [list] [network] circadian rhythm
|
(123 genes)
|
IEP
|
|
|
GO:0010150 [list] [network] leaf senescence
|
(195 genes)
|
IEP
|
|
|
GO:0006979 [list] [network] response to oxidative stress
|
(545 genes)
|
IMP
|
|
= more 6 terms =
|
| GO CC |
|
| GO MF |
|
GO:0022857 [list] [network] transmembrane transporter activity
|
(1006 genes)
|
ISS
|
|
|
| KEGG |
|
|
| Protein |
NP_201299.2
NP_851271.1
|
| BLAST |
NP_201299.2
NP_851271.1
|
| Orthologous |
[Ortholog page]
LOC4329751 (osa)
LOC7486330 (ppo)
LOC11428223 (mtr)
LOC11436172 (mtr)
LOC18100979 (ppo)
LOC100782151 (gma)
LOC100791330 (gma)
LOC100801705 (gma)
LOC100804542 (gma)
LOC101248189 (sly)
LOC103873919 (bra)
LOC123127534 (tae)
LOC123137115 (tae)
LOC123144619 (tae)
LOC123405421 (hvu)
|
Subcellular
localization
wolf |
|
chlo 9
|
(predict for NP_201299.2)
|
|
chlo 9
|
(predict for NP_851271.1)
|
|
Subcellular
localization
TargetP |
|
chlo 9
|
(predict for NP_201299.2)
|
|
chlo 9
|
(predict for NP_851271.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00860 |
Porphyrin metabolism |
5 |
 |
| ath04712 |
Circadian rhythm - plant |
2 |
 |
Genes directly connected with ATH13 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 11.6 |
GUN5 |
magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH) |
[detail] |
831207 |
| 10.2 |
CCA1 |
circadian clock associated 1 |
[detail] |
819296 |
| 10.1 |
SIGA |
sigma factor A |
[detail] |
842794 |
| 10.0 |
PHT2;1 |
phosphate transporter 2;1 |
[detail] |
822265 |
| 9.9 |
CH1 |
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein |
[detail] |
841029 |
| 9.0 |
SLP1 |
Calcineurin-like metallo-phosphoesterase superfamily protein |
[detail] |
837211 |
| 8.7 |
AT5G57345 |
uncharacterized protein |
[detail] |
835840 |
| 7.3 |
PSY |
PHYTOENE SYNTHASE |
[detail] |
831587 |
| 6.3 |
AT2G40400 |
DUF399 family protein, putative (DUF399 and DUF3411) |
[detail] |
818633 |
| 5.1 |
AT1G73660 |
protein tyrosine kinase family protein |
[detail] |
843701 |
|
Coexpressed
gene list |
[Coexpressed gene list for ATH13]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
247232_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
247232_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
247232_at
X axis is samples (xls file), and Y axis is log-expression.
|
At5g64940 Gene
