[←][→] ath   At5g66100 Gene
functional annotation
Function   winged-helix DNA-binding transcription factor family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010150 [list] [network] leaf senescence  (195 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_001330746.1  NP_201411.2 
BLAST NP_001330746.1  NP_201411.2 
Orthologous [Ortholog page] LARP1c (ath)  LOC4331669 (osa)  LOC7462584 (ppo)  LOC7493989 (ppo)  LOC11409237 (mtr)  LOC11418763 (mtr)  LOC11427406 (mtr)  LOC11432143 (mtr)  LOC11444870 (mtr)  LOC18099146 (ppo)  LOC100775279 (gma)  LOC100778603 (gma)  LOC100785504 (gma)  LOC100792549 (gma)  LOC100794531 (gma)  LOC100803372 (gma)  LOC100811819 (gma)  LOC100819612 (gma)  LOC101244368 (sly)  LOC101255266 (sly)  LOC103834922 (bra)  LOC103837670 (bra)  LOC103862438 (bra)  LOC103872339 (bra)  LOC104645983 (sly)  LOC123084897 (tae)  LOC123093196 (tae)  LOC123098457 (tae)  LOC123449478 (hvu) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001330746.1)
nucl 9,  cyto_nucl 5  (predict for NP_201411.2)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001330746.1)
chlo 7  (predict for NP_201411.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
ath03040 Spliceosome 3
Genes directly connected with LARP1b on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.8 ELF7 hydroxyproline-rich glycoprotein family protein [detail] 844312
6.8 TAF15b TBP-associated factor 15B [detail] 835960
6.0 SE C2H2 zinc-finger protein SERRATE (SE) [detail] 817252
Coexpressed
gene list		 [Coexpressed gene list for LARP1b]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247127_at
247127_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247127_at
247127_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247127_at
247127_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836742      
Refseq ID (protein) NP_001330746.1 
NP_201411.2 


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