[][] ath   AT5G66190 Gene
functional annotation
Function   ferredoxin-NADP[+]-oxidoreductase 1
GO BP
GO:0009767 [list] [network] photosynthetic electron transport chain  (35 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IEP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IDA  
GO CC
GO:0031977 [list] [network] thylakoid lumen  (72 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  HDA  
GO MF
GO:0045157 [list] [network] electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity  (1 genes)  IDA  
GO:0003959 [list] [network] NADPH dehydrogenase activity  (3 genes)  IDA  
GO:0004324 [list] [network] ferredoxin-NADP+ reductase activity  (4 genes)  IEA  
GO:0045156 [list] [network] electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity  (6 genes)  IDA  
GO:0008266 [list] [network] poly(U) RNA binding  (28 genes)  IDA  
KEGG ath00195 [list] [network] Photosynthesis (76 genes)
Protein NP_001078805.1  NP_201420.1 
BLAST NP_001078805.1  NP_201420.1 
Orthologous [Ortholog page] LOC541626 (zma)LOC542558 (zma)FNR2 (ath)LOC4328000 (osa)LOC4339874 (osa)LOC11418744 (mtr)LOC100241976 (vvi)LOC100252241 (vvi)LOC100282643 (zma)LOC100793840 (gma)LOC100798467 (gma)LOC100802032 (gma)LOC101251845 (sly)LOC101261284 (sly)LOC103829458 (bra)LOC103835814 (bra)LOC103837674 (bra)
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for NP_001078805.1)
chlo 6,  chlo_mito 4,  vacu 1,  mito 1  (predict for NP_201420.1)
Subcellular
localization
TargetP
mito 5,  other 5  (predict for NP_001078805.1)
chlo 8  (predict for NP_201420.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 9
ath00710 Carbon fixation in photosynthetic organisms 8
ath00195 Photosynthesis 5
ath00010 Glycolysis / Gluconeogenesis 3
ath00030 Pentose phosphate pathway 3
Genes directly connected with FNR1 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
12.7 PETC photosynthetic electron transfer C [detail] 827996
10.3 GAPB glyceraldehyde-3-phosphate dehydrogenase B subunit [detail] 840895
10.3 ATPC1 ATPase, F1 complex, gamma subunit protein [detail] 825797
8.8 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein [detail] 820167
8.3 AT4G02530 chloroplast thylakoid lumen protein [detail] 827927
Coexpressed
gene list
[Coexpressed gene list for FNR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247131_at
247131_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247131_at
247131_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
247131_at
247131_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 836751    
Refseq ID (protein) NP_001078805.1 
NP_201420.1 


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