[←][→] ath   AT5G66240 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO:0009827 [list] [network] plant-type cell wall modification  (62 genes)  IMP  
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001190633.1  NP_569031.1  NP_851281.1 
BLAST NP_001190633.1  NP_569031.1  NP_851281.1 
Orthologous [Ortholog page] LOC4343770 (osa)  LOC25501403 (mtr)  LOC100255744 (vvi)  LOC100273578 (zma)  LOC100807825 (gma)  LOC100810444 (gma)  LOC101258611 (sly)  LOC103855351 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1  (predict for NP_001190633.1)
cyto 4,  nucl 3,  extr 1,  nucl_plas 1  (predict for NP_569031.1)
cyto 6,  chlo 2,  nucl 1  (predict for NP_851281.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001190633.1)
other 8  (predict for NP_569031.1)
other 8  (predict for NP_851281.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT5G66240 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 MTN1 methylthioadenosine nucleosidase 1 [detail] 830035
7.9 AT5G47435 formyltetrahydrofolate deformylase [detail] 834791
7.2 AT4G36440 G-protein coupled receptor [detail] 829796
7.0 AT3G18215 transmembrane protein, putative (Protein of unknown function, DUF599) [detail] 821349
6.7 AT1G10660 transmembrane protein [detail] 837609
6.3 AT5G51170 U6 snRNA phosphodiesterase-like protein [detail] 835191
5.6 PIS2 Putative CDP-diacylglycerol-inositol 3-phosphatidyltransferase 2 [detail] 830014
Coexpressed
gene list		 [Coexpressed gene list for AT5G66240]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247106_at
247106_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247106_at
247106_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247106_at
247106_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836756      
Refseq ID (protein) NP_001190633.1 
NP_569031.1 
NP_851281.1 


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