[←][→] ath   At5g66540 Gene
functional annotation
Function   U3 small nucleolar ribonucleoprotein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (96 genes)
Protein NP_001332723.1  NP_569037.1 
BLAST NP_001332723.1  NP_569037.1 
Orthologous [Ortholog page] LOC543426 (tae)  LOC4349717 (osa)  LOC4351433 (osa)  LOC7453774 (ppo)  LOC7458040 (ppo)  LOC25493756 (mtr)  LOC100781093 (gma)  LOC100817724 (gma)  LOC101253879 (sly)  LOC103829595 (bra)  LOC103837692 (bra)  LOC123103083 (tae)  LOC123120459 (tae)  LOC123453192 (hvu) 
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001332723.1)
cyto 5,  nucl 4  (predict for NP_569037.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001332723.1)
other 8  (predict for NP_569037.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
Genes directly connected with AT5G66540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.7 AT1G69070 nucleolar-like protein [detail] 843239
13.6 AT3G01160 pre-rRNA-processing ESF1-like protein [detail] 820504
13.3 AT2G18220 Noc2p family [detail] 816337
12.1 AT5G38720 ribosomal RNA-processing 7 protein [detail] 833863
12.0 AT1G60640 stress response protein [detail] 842358
12.0 AT1G29320 Transducin/WD40 repeat-like superfamily protein [detail] 839806
10.7 AT5G48240 Rrp15p protein [detail] 834877
Coexpressed
gene list		 [Coexpressed gene list for AT5G66540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247046_at
247046_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247046_at
247046_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247046_at
247046_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836786      
Refseq ID (protein) NP_001332723.1 
NP_569037.1 


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