[←][→] ath   At5g67580 Gene
functional annotation
Function   Homeodomain-like/winged-helix DNA-binding family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006334 [list] [network] nucleosome assembly  (13 genes)  IEA  
GO:0006996 [list] [network] organelle organization  (1102 genes)  IEA  
GO CC
GO:0000786 [list] [network] nucleosome  (9 genes)  IEA  
GO:0000785 [list] [network] chromatin  (135 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0043047 [list] [network] single-stranded telomeric DNA binding  (4 genes)  IDA  
GO:0003691 [list] [network] double-stranded telomeric DNA binding  (8 genes)  IDA  
GO:0042162 [list] [network] telomeric DNA binding  (13 genes)  IDA  
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IPI  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_201559.1  NP_851286.1 
BLAST NP_201559.1  NP_851286.1 
Orthologous [Ortholog page] MYB85 (gma)  LOC778165 (gma)  MYB55 (gma)  TRB3 (ath)  TRB1 (ath)  LOC4324449 (osa)  LOC4352780 (osa)  LOC7464767 (ppo)  LOC7469640 (ppo)  LOC7470752 (ppo)  LOC7497744 (ppo)  LOC11416450 (mtr)  LOC11434948 (mtr)  LOC11440962 (mtr)  LOC25486339 (mtr)  LOC25502915 (mtr)  LOC100780698 (gma)  LOC100796539 (gma)  LOC100873114 (tae)  LOC101247285 (sly)  LOC101248266 (sly)  LOC101263059 (sly)  LOC103827702 (bra)  LOC103832906 (bra)  LOC103837601 (bra)  LOC103849550 (bra)  LOC103871379 (bra)  LOC103874040 (bra)  LOC123061376 (tae)  LOC123070023 (tae)  LOC123078482 (tae)  LOC123102175 (tae)  LOC123107777 (tae)  LOC123110326 (tae)  LOC123119357 (tae)  LOC123125503 (tae)  LOC123396741 (hvu)  LOC123398226 (hvu)  LOC123398474 (hvu)  LOC123409401 (hvu)  LOC123441376 (hvu)  LOC123443794 (hvu)  LOC123450580 (hvu) 
Subcellular
localization
wolf
nucl 4,  mito 3,  cyto_nucl 3  (predict for NP_201559.1)
nucl 4,  mito 3,  cyto_nucl 3  (predict for NP_851286.1)
Subcellular
localization
TargetP
other 8  (predict for NP_201559.1)
other 8  (predict for NP_851286.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TRB2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 FRS7 FAR1-related sequence 7 [detail] 819799
5.7 AT5G64250 Aldolase-type TIM barrel family protein [detail] 836546
5.4 RIN2 RPM1 interacting protein 2 [detail] 828626
5.2 TRB3 telomere repeat binding factor 3 [detail] 824147
Coexpressed
gene list		 [Coexpressed gene list for TRB2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
247012_at
247012_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
247012_at
247012_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
247012_at
247012_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 836894      
Refseq ID (protein) NP_201559.1 
NP_851286.1 


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