[←][→] ath   AT1G08830 Gene
functional annotation
Function   copper/zinc superoxide dismutase 1  
GO BP
GO:0071280 [list] [network] cellular response to copper ion  (3 genes)  IEP  
GO:0071457 [list] [network] cellular response to ozone  (3 genes)  IEP  
GO:0071493 [list] [network] cellular response to UV-B  (7 genes)  IEP  
GO:0071329 [list] [network] cellular response to sucrose stimulus  (9 genes)  IEP  
GO:0019430 [list] [network] removal of superoxide radicals  (11 genes)  IBA IC  
GO:0071484 [list] [network] cellular response to light intensity  (12 genes)  IEP  
GO:0010039 [list] [network] response to iron ion  (24 genes)  IEP  
GO:0046688 [list] [network] response to copper ion  (25 genes)  IEP  
GO:0010193 [list] [network] response to ozone  (36 genes)  IEP  
GO:0071472 [list] [network] cellular response to salt stress  (40 genes)  IEP  
GO:0034599 [list] [network] cellular response to oxidative stress  (63 genes)  IEP  
GO:0035195 [list] [network] gene silencing by miRNA  (94 genes)  IEP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (442 genes)  IEP TAS  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005615 [list] [network] extracellular space  (167 genes)  IBA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA TAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM NAS  
GO MF
GO:0004784 [list] [network] superoxide dismutase activity  (9 genes)  IBA IDA TAS  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04146 [list] [network] Peroxisome (87 genes)
Protein NP_001077494.1  NP_172360.1 
BLAST NP_001077494.1  NP_172360.1 
Orthologous [Ortholog page] LOC542260 (zma)  LOC542722 (zma)  SODCC.1 (sly)  CSD3 (ath)  LOC4332082 (osa)  LOC4332846 (osa)  LOC4344210 (osa)  LOC7473899 (ppo)  LOC7474659 (ppo)  LOC11417511 (mtr)  LOC11432262 (mtr)  LOC100241809 (vvi)  LOC100260705 (vvi)  LOC100282741 (zma)  LOC100305732 (gma)  SOD1 (gma)  LOC100780008 (gma)  LOC101264296 (sly)  LOC103639134 (zma)  LOC103843378 (bra)  LOC103845867 (bra)  LOC103871624 (bra) 
Subcellular
localization
wolf
cyto 10  (predict for NP_001077494.1)
cyto 10  (predict for NP_172360.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001077494.1)
other 6  (predict for NP_172360.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04146 Peroxisome 2
Genes directly connected with CSD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
23.8 CSD2 copper/zinc superoxide dismutase 2 [detail] 817365
19.1 CCS copper chaperone for SOD1 [detail] 837808
13.4 AT3G15640 Rubredoxin-like superfamily protein [detail] 820806
8.6 ARPN plantacyanin [detail] 814816
5.0 BCB blue-copper-binding protein [detail] 832145
Coexpressed
gene list		 [Coexpressed gene list for CSD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264809_at
264809_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264809_at
264809_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264809_at
264809_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837405      
Refseq ID (protein) NP_001077494.1 
NP_172360.1 


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