[←][→] ath   AT3G52960 Gene
functional annotation
Function   Thioredoxin superfamily protein  
GO BP
GO:0034599 [list] [network] cellular response to oxidative stress  (63 genes)  IBA  
GO:0042744 [list] [network] hydrogen peroxide catabolic process  (92 genes)  IBA  
GO:0045454 [list] [network] cell redox homeostasis  (142 genes)  IBA  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IEP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0008379 [list] [network] thioredoxin peroxidase activity  (8 genes)  IBA  
KEGG
Protein NP_190864.1 
BLAST NP_190864.1 
Orthologous [Ortholog page] LOC4328586 (osa)  LOC4341570 (osa)  LOC25499388 (mtr)  LOC100264932 (vvi)  LOC100282052 (zma)  LOC100783307 (gma)  LOC103842281 (bra)  LOC103872156 (bra)  LOC104644379 (sly) 
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_190864.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_190864.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 3
ath01200 Carbon metabolism 3
ath00010 Glycolysis / Gluconeogenesis 2
ath00020 Citrate cycle (TCA cycle) 2
ath00061 Fatty acid biosynthesis 2
Genes directly connected with AT3G52960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.5 YLMG1-1 YGGT family protein [detail] 819931
9.8 PHR2 photolyase/blue-light receptor 2 [detail] 819372
8.9 CAC1 chloroplastic acetylcoenzyme A carboxylase 1 [detail] 831500
8.2 AT2G31670 Stress responsive alpha-beta barrel domain protein [detail] 817723
7.4 TIC21 translocon at inner membrane of chloroplasts 21 [detail] 816018
7.2 COS1 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [detail] 819010
6.9 FAP1 Chalcone-flavanone isomerase family protein [detail] 825492
Coexpressed
gene list		 [Coexpressed gene list for AT3G52960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251993_at
251993_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251993_at
251993_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251993_at
251993_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824462      
Refseq ID (protein) NP_190864.1 


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