[←][→] ath   AT4G25100 Gene
functional annotation
Function   Fe superoxide dismutase 1  
GO BP
GO:0019430 [list] [network] removal of superoxide radicals  (11 genes)  IC  
GO:0046688 [list] [network] response to copper ion  (25 genes)  IEP  
GO:0010193 [list] [network] response to ozone  (36 genes)  IEP  
GO:0007623 [list] [network] circadian rhythm  (111 genes)  IEP  
GO:0009642 [list] [network] response to light intensity  (148 genes)  IEP  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (442 genes)  IDA  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0031969 [list] [network] chloroplast membrane  (259 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM NAS  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0004784 [list] [network] superoxide dismutase activity  (9 genes)  IDA IMP  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04146 [list] [network] Peroxisome (87 genes)
Protein NP_001031710.1  NP_001190834.1  NP_194240.1  NP_849440.1  NP_849441.1 
BLAST NP_001031710.1  NP_001190834.1  NP_194240.1  NP_849440.1  NP_849441.1 
Orthologous [Ortholog page] FESOD (sly)  SODB2 (gma)  SODB (gma)  FSD2 (ath)  LOC4339922 (osa)  LOC7456676 (ppo)  LOC25483199 (mtr)  LOC100258067 (vvi)  LOC100274012 (zma)  LOC100813221 (gma)  LOC100814802 (gma)  LOC101248277 (sly)  LOC103857203 (bra)  FSD1 (bra) 
Subcellular
localization
wolf
cyto_nucl 3,  nucl 3,  cyto 3,  nucl_plas 2  (predict for NP_001031710.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_001190834.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_194240.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_849440.1)
chlo 4,  cyto 3,  cyto_E.R. 2,  nucl 1,  nucl_plas 1  (predict for NP_849441.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031710.1)
other 4,  scret 4  (predict for NP_001190834.1)
other 4,  scret 4  (predict for NP_194240.1)
other 4,  scret 4  (predict for NP_849440.1)
other 4,  scret 4  (predict for NP_849441.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with FSD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.7 YSL2 YELLOW STRIPE like 2 [detail] 832509
9.6 CCH copper chaperone [detail] 824790
6.9 ZIP2 ZRT/IRT-like protein 2 [detail] 836071
6.5 AT2G25625 histone deacetylase-like protein [detail] 817103
5.7 YSL3 YELLOW STRIPE like 3 [detail] 835437
4.7 AT2G47010 calcium/calcium/calmodulin-dependent Serine/Threonine-kinase [detail] 819315
Coexpressed
gene list		 [Coexpressed gene list for FSD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254098_at
254098_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254098_at
254098_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254098_at
254098_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828613      
Refseq ID (protein) NP_001031710.1 
NP_001190834.1 
NP_194240.1 
NP_849440.1 
NP_849441.1 


The preparation time of this page was 0.3 [sec].