cis; CCGCGTT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCGCGTT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCGCGTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At3g50060myb family transcription factor MYB
0.63At5g24590turnip crinkle virus-interacting protein / TCV-interacting protein (TIP) ((TIP)) NAC
0.61At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.61At1g22510zinc finger (C3HC4-type RING finger) family protein C3H
0.60At3g15210ethylene-responsive element-binding factor 4 (ERF4) ((ATERF4, RAP2.5)) AP2-EREBP
0.59At3g52800zinc finger (AN1-like) family protein C2H2
0.57At1g21910AP2 domain-containing transcription factor family protein AP2-EREBP
0.57At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.56At4g34410AP2 domain-containing transcription factor, putative AP2-EREBP
0.56At2g46830myb-related transcription factor (CCA1) ((CCA1)) MYB-related
0.56At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.55At1g20823zinc finger (C3HC4-type RING finger) family protein C3H
0.55At3g20310ethylene-responsive element-binding family protein ((ATERF7)) AP2-EREBP
0.55At2g44840ethylene-responsive element-binding protein, putative AP2-EREBP
0.55At4g01250WRKY family transcription factor ((WRKY22)) WRKY

link to other 304 cis elements in ATTED

similar seq.
CCGCGTT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AACGCGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCGCGTT1.000.1017
CGCGTTT0.940.1193
ACCGCGT0.920.1098
ACGCGTT0.920.1096
AACCGCG0.920.0985
AACGCGT0.920.10127
ACGCGTA0.910.1074
ACGCGCT0.900.09111
ACGCGGT0.900.09141
ATACGCG0.880.0639