cis; CCTTATC


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of CCTTATC

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of CCTTATC.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.65At4g14540CCAAT-box binding transcription factor subunit B (NF-YB) (HAP3 ) (AHAP3) family CCAAT-HAP3
0.60At1g68190zinc finger (B-box type) family protein C2C2-CO-like
0.60At1g68520zinc finger (B-box type) family protein C2C2-CO-like
0.56At4g36540basic helix-loop-helix (bHLH) family protein BHLH
0.56At5g63470CCAAT-box binding transcription factor Hap5a, putative CCAAT-HAP5
0.55At2g18300basic helix-loop-helix (bHLH) family protein BHLH
0.50At4g01460basic helix-loop-helix (bHLH) family protein BHLH
0.49At2g02450no apical meristem (NAM) family protein NAC
0.48At2g20180basic helix-loop-helix (bHLH) family protein ((PIL5)) BHLH
0.48At5g63780zinc finger (C3HC4-type RING finger) family protein C3H
0.48At1g34310transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related ARF
0.47At2g26580plant-specific transcription factor YABBY family protein C2C2-YABBY
0.46At2g02070zinc finger (C2H2 type) family protein C2H2
0.46At1g12860basic helix-loop-helix (bHLH) family protein / F-box family protein BHLH
0.46At1g19000myb family transcription factor MYB-related

link to other 304 cis elements in ATTED

similar seq.
CCTTATC
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; GATAAGG
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
CCTTATC1.000.1017
GATAAGG0.950.0739
TGGATAA0.950.0712
AGATAAG0.950.0838
TATCCAC0.950.0753
CTTATCT0.940.0821
CTTATCC0.940.1153
TCTTATC0.920.0923
ATCTTAT0.920.0723
GATAAGA0.910.0742