cis; GATATTT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
 ATATT  ROOTMOTIFTAPOX1 [ref]
GATA    GATABOX [ref] [ref] [ref] [ref] [ref]

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of GATATTT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of GATATTT.

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correlTFfunction ((alias))*TF family
(link to AGRIS)
0.72At1g49720ABA-responsive element-binding protein / abscisic acid responsive elements-binding factor (ABRE) ((ABF1)) bZIP
-0.69At1g01060myb family transcription factor ((LHY)) MYB-related
0.63At5g48250zinc finger (B-box type) family protein C2C2-CO-like
0.62At5g16820heat shock factor protein 3 (HSF3) / heat shock transcription factor 3 (HSTF3) ((HSF3)) HSF
0.60At1g28050zinc finger (B-box type) family protein C2C2-CO-like
0.60At3g50700zinc finger (C2H2 type) family protein C2H2
0.59At2g47890zinc finger (B-box type) family protein C2C2-CO-like
0.58At5g18680F-box family protein / tubby family protein TUB
0.56At1g22070bZIP family transcription factor (TGA3) ((TGA3)) bZIP
0.56At1g04990zinc finger (CCCH-type) family protein C2H2
0.56At3g46640myb family transcription factor G2-like
-0.55At4g38960zinc finger (B-box type) family protein C2C2-CO-like
0.55At3g07650zinc finger (B-box type) family protein C2C2-CO-like
0.54At2g03340WRKY family transcription factor ((WRKY3)) WRKY
0.54At1g08900sugar transporter-related C2H2

link to other 304 cis elements in ATTED

similar seq.
GATATTT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; AAATATC
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
GATATTT1.000.1049
AGATATT0.970.1128
AAGATAT0.890.0750
AATATCT0.860.1480
AAATATC0.860.1477
ATATCTA0.760.0889
ATATCTT0.650.0779