cis; TCTCTAT


Correspondence to reported cis elements* on sequence level (perfect match)

reported seqreported namereference
no correspondence

CEG profile for position preference


CEG profile for exprimental conditions


Red circles indicate absolute CEG value > 0.06. Experimental condition pop up when the mouse is over a sample of red circle.

Analysis of functional categories (BP or CC*) related to presence of TCTCTAT

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GO IDterm-Log(p)number of
{A; genes in a GO}
numver of
{B; genes with this heptamer}
{A} x {B}
no functional bias detected

List of predicted TFs whose mRNA profiles are correlated (|r| > 0.4, up to 15 TFs) with CEG profile of TCTCTAT.

[Help]
correlTFfunction ((alias))*TF family
(link to AGRIS)
0.67At5g49520WRKY family transcription factor ((WRKY48)) WRKY
0.67At5g66070zinc finger (C3HC4-type RING finger) family protein C3H
0.66At1g80840WRKY family transcription factor ((WRKY40)) WRKY
0.64At5g67300myb family transcription factor MYB
0.64At1g28370ERF domain protein 11 (ERF11) AP2-EREBP
0.63At2g38470WRKY family transcription factor ((WRKY33)) WRKY
0.62At4g17490ethylene-responsive element-binding protein, putative ((ATERF6, ERF-6-6)) AP2-EREBP
0.62At3g23250myb family transcription factor (MYB15) MYB
0.62At4g31550WRKY family transcription factor ((WRKY11)) WRKY
0.61At3g52800zinc finger (AN1-like) family protein C2H2
0.60At5g47230ethylene-responsive element-binding factor 5 (ERF5) ((ATERF5)) AP2-EREBP
0.60At4g01250WRKY family transcription factor ((WRKY22)) WRKY
0.59At1g27730zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) ((ZAT10)) C2H2
0.59At4g17230scarecrow-like transcription factor 13 (SCL13) GRAS
0.59At4g31800WRKY family transcription factor ((WRKY18)) WRKY

link to other 304 cis elements in ATTED

similar seq.
TCTCTAT
AAAAAAAAA
CCCCCCCCC
GGGGGGGGG
TTTTTTTTT

complimentary; ATAGAGA
cis with similar CEG profile
similar cisCEG correlmaxCEGbest position
TCTCTAT1.000.0710
CTCTATA0.900.107
CTATATA0.810.144
TCTATAT0.790.111
TAAATAC0.780.0636
TATATAA0.770.111
ATAAATA0.760.0917
TATAAAT0.740.1018
TCTATAA0.730.074
TAAATAG0.720.072