[][] ath   AT2G39730 Gene
functional annotation
Function   rubisco activase
GO BP
GO:0010150 [list] [network] leaf senescence  (111 genes)  IMP  
GO:0009753 [list] [network] response to jasmonic acid  (222 genes)  IEP  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IEP  
GO:0009409 [list] [network] response to cold  (411 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (700 genes)  IEP  
GO CC
GO:0010319 [list] [network] stromule  (33 genes)  IDA  
GO:0010287 [list] [network] plastoglobule  (68 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM NAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0046863 [list] [network] ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity  (1 genes)  IDA  
GO:0043531 [list] [network] ADP binding  (127 genes)  IDA  
GO:0030234 [list] [network] enzyme regulator activity  (427 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IDA  
KEGG
Protein NP_565913.1  NP_850320.1  NP_850321.1 
BLAST NP_565913.1  NP_850320.1  NP_850321.1 
Orthologous [Ortholog page] LOC541712 (zma)LOC4351224 (osa)LOC7458129 (ppo)LOC7468818 (ppo)LOC7487971 (ppo)LOC11412610 (mtr)LOC11442149 (mtr)LOC25489329 (mtr)LOC100256315 (vvi)LOC100263871 (vvi)LOC100266698 (vvi)LOC100382265 (zma)RCA14 (gma)RCA03 (gma)RCABETA (gma)RCAALPHA (gma)RCA11 (gma)LOC101249777 (sly)LOC101250725 (sly)LOC103857877 (bra)RCA (bra)LOC103867016 (bra)
Subcellular
localization
wolf
chlo 10  (predict for NP_565913.1)
chlo 10  (predict for NP_850320.1)
chlo 10  (predict for NP_850321.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_565913.1)
chlo 8  (predict for NP_850320.1)
chlo 8  (predict for NP_850321.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 11
ath00710 Carbon fixation in photosynthetic organisms 9
ath00195 Photosynthesis 5
ath00630 Glyoxylate and dicarboxylate metabolism 5
ath01230 Biosynthesis of amino acids 3
Genes directly connected with RCA on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
15.3 FBA2 fructose-bisphosphate aldolase 2 [detail] 830052
12.2 GAPB glyceraldehyde-3-phosphate dehydrogenase B subunit [detail] 840895
12.0 PETC photosynthetic electron transfer C [detail] 827996
10.8 GGT1 glutamate:glyoxylate aminotransferase [detail] 838940
8.8 GOX2 Aldolase-type TIM barrel family protein [detail] 820664
7.4 AOR Oxidoreductase, zinc-binding dehydrogenase family protein [detail] 838984
7.2 PHT2;1 phosphate transporter 2;1 [detail] 822265
Coexpressed
gene list
[Coexpressed gene list for RCA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245061_at
245061_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245061_at
245061_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245061_at
245061_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 818558    
Refseq ID (protein) NP_565913.1 
NP_850320.1 
NP_850321.1 


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